Hb_003702_050

Information

Type -
Description -
Location Contig3702: 58689-65696
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa011813mg
description hypothetical protein
nr
ID XP_012091747.1
description PREDICTED: uncharacterized protein LOC105649649 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JM48
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21546 PE=4 SV=1
Gene Ontology
ID GO:0005773
description 3r-hydroxymyristoyl- dehydratase-hydroxymyristoyl acp dehydrase isoform 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003702_050 0.0 - - PREDICTED: uncharacterized protein LOC105649649 [Jatropha curcas]
2 Hb_169488_010 0.087663699 - - PREDICTED: choline monooxygenase, chloroplastic-like [Populus euphratica]
3 Hb_063511_010 0.1777829905 - - DNA-directed RNA polymerase II subunit RPB4 [Gossypium arboreum]
4 Hb_001951_280 0.1790566767 - - -
5 Hb_000003_690 0.1824579838 - - -
6 Hb_126398_010 0.1898664498 - - -
7 Hb_015091_010 0.2093194985 - - PREDICTED: uncharacterized protein LOC104216022, partial [Nicotiana sylvestris]
8 Hb_001544_020 0.2158187507 - - -
9 Hb_001981_080 0.2309191999 - - PREDICTED: mitochondrial tRNA-specific 2-thiouridylase 1 isoform X4 [Musa acuminata subsp. malaccensis]
10 Hb_157340_010 0.2451924712 - - hypothetical protein CISIN_1g0109951mg, partial [Citrus sinensis]
11 Hb_002365_010 0.2535399547 - - hypothetical protein CISIN_1g0405342mg, partial [Citrus sinensis]
12 Hb_005595_020 0.256710955 - - -
13 Hb_135403_010 0.2575447595 - - HEV1.1 [Hevea brasiliensis]
14 Hb_005222_010 0.2582870238 - - hypothetical protein MTR_1g033950 [Medicago truncatula]
15 Hb_006501_030 0.2643298338 - - hypothetical protein POPTR_0006s17720g [Populus trichocarpa]
16 Hb_075642_010 0.2722324016 - - PREDICTED: uncharacterized protein LOC105647831 [Jatropha curcas]
17 Hb_061581_010 0.286383327 desease resistance Gene Name: ABC_tran ABC transporter family protein [Hevea brasiliensis]
18 Hb_001014_200 0.291341847 - - -
19 Hb_000348_040 0.2955394487 - - -
20 Hb_011537_120 0.2974315572 - - -

Gene co-expression network

sample Hb_003702_050 Hb_003702_050 Hb_169488_010 Hb_169488_010 Hb_003702_050--Hb_169488_010 Hb_063511_010 Hb_063511_010 Hb_003702_050--Hb_063511_010 Hb_001951_280 Hb_001951_280 Hb_003702_050--Hb_001951_280 Hb_000003_690 Hb_000003_690 Hb_003702_050--Hb_000003_690 Hb_126398_010 Hb_126398_010 Hb_003702_050--Hb_126398_010 Hb_015091_010 Hb_015091_010 Hb_003702_050--Hb_015091_010 Hb_169488_010--Hb_001951_280 Hb_169488_010--Hb_063511_010 Hb_001544_020 Hb_001544_020 Hb_169488_010--Hb_001544_020 Hb_169488_010--Hb_015091_010 Hb_169488_010--Hb_000003_690 Hb_063511_010--Hb_015091_010 Hb_063511_010--Hb_001951_280 Hb_000348_040 Hb_000348_040 Hb_063511_010--Hb_000348_040 Hb_006501_030 Hb_006501_030 Hb_063511_010--Hb_006501_030 Hb_001951_280--Hb_015091_010 Hb_001951_280--Hb_000348_040 Hb_005063_070 Hb_005063_070 Hb_001951_280--Hb_005063_070 Hb_075642_010 Hb_075642_010 Hb_000003_690--Hb_075642_010 Hb_002365_010 Hb_002365_010 Hb_000003_690--Hb_002365_010 Hb_000003_690--Hb_126398_010 Hb_001981_080 Hb_001981_080 Hb_000003_690--Hb_001981_080 Hb_162999_010 Hb_162999_010 Hb_126398_010--Hb_162999_010 Hb_126398_010--Hb_001981_080 Hb_135403_010 Hb_135403_010 Hb_126398_010--Hb_135403_010 Hb_000048_090 Hb_000048_090 Hb_126398_010--Hb_000048_090 Hb_002153_010 Hb_002153_010 Hb_126398_010--Hb_002153_010 Hb_004297_030 Hb_004297_030 Hb_015091_010--Hb_004297_030 Hb_015091_010--Hb_000348_040 Hb_088496_010 Hb_088496_010 Hb_015091_010--Hb_088496_010 Hb_015091_010--Hb_006501_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0.0898733 4.09979
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.25101 0.925722 0 0 0

CAGE analysis