Hb_135403_010

Information

Type -
Description -
Location Contig135403: 1203-1908
Sequence    

Annotation

kegg
ID rcu:RCOM_0484460
description Wound-induced protein WIN2 precursor, putative
nr
ID AAO63571.1
description HEV1.1 [Hevea brasiliensis]
swissprot
ID P02877
description Pro-hevein OS=Hevea brasiliensis GN=HEV1 PE=1 SV=2
trembl
ID Q6JYR0
description HEV1.1 OS=Hevea brasiliensis PE=4 SV=1
Gene Ontology
ID GO:0050832
description wound-induced protein win2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_135403_010 0.0 - - HEV1.1 [Hevea brasiliensis]
2 Hb_061581_010 0.1298020062 desease resistance Gene Name: ABC_tran ABC transporter family protein [Hevea brasiliensis]
3 Hb_121236_010 0.1661412298 - - geranyl-diphosphate synthase [Hevea brasiliensis]
4 Hb_001488_110 0.1772569699 - - -
5 Hb_001095_060 0.1809469432 - - Uncharacterized protein TCM_012505 [Theobroma cacao]
6 Hb_000122_030 0.1851269869 - - PREDICTED: uncharacterized protein LOC104606081, partial [Nelumbo nucifera]
7 Hb_115919_010 0.1860278451 - - unknown [Lotus japonicus]
8 Hb_004502_050 0.1967729246 - - hypothetical protein POPTR_1488s00200g [Populus trichocarpa]
9 Hb_126398_010 0.1968353304 - - -
10 Hb_027445_060 0.2090422292 - - PREDICTED: pescadillo homolog isoform X1 [Jatropha curcas]
11 Hb_005935_010 0.2107404537 - - -
12 Hb_005305_060 0.2168184276 - - hypothetical protein MIMGU_mgv1a015111mg [Erythranthe guttata]
13 Hb_000832_240 0.2181499494 - - conserved hypothetical protein [Ricinus communis]
14 Hb_068946_010 0.2245139608 - - hypothetical protein CICLE_v100122621mg, partial [Citrus clementina]
15 Hb_001310_070 0.228324975 - - PREDICTED: uncharacterized protein LOC105639838 [Jatropha curcas]
16 Hb_028639_050 0.231197356 - - Anopheles gambiae str. PEST AGAP012660-PA [Anopheles gambiae str. PEST]
17 Hb_001012_020 0.2333178494 transcription factor TF Family: M-type unnamed protein product [Coffea canephora]
18 Hb_162999_010 0.2390113467 - - MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]
19 Hb_032531_060 0.2390446437 - - hypothetical protein PRUPE_ppa017035mg, partial [Prunus persica]
20 Hb_002626_020 0.2419072522 - - PREDICTED: methylthioribose-1-phosphate isomerase [Jatropha curcas]

Gene co-expression network

sample Hb_135403_010 Hb_135403_010 Hb_061581_010 Hb_061581_010 Hb_135403_010--Hb_061581_010 Hb_121236_010 Hb_121236_010 Hb_135403_010--Hb_121236_010 Hb_001488_110 Hb_001488_110 Hb_135403_010--Hb_001488_110 Hb_001095_060 Hb_001095_060 Hb_135403_010--Hb_001095_060 Hb_000122_030 Hb_000122_030 Hb_135403_010--Hb_000122_030 Hb_115919_010 Hb_115919_010 Hb_135403_010--Hb_115919_010 Hb_061581_010--Hb_121236_010 Hb_061581_010--Hb_115919_010 Hb_032531_060 Hb_032531_060 Hb_061581_010--Hb_032531_060 Hb_061581_010--Hb_001095_060 Hb_034579_010 Hb_034579_010 Hb_061581_010--Hb_034579_010 Hb_121236_010--Hb_115919_010 Hb_027445_060 Hb_027445_060 Hb_121236_010--Hb_027445_060 Hb_121236_010--Hb_001095_060 Hb_005305_060 Hb_005305_060 Hb_121236_010--Hb_005305_060 Hb_077562_040 Hb_077562_040 Hb_001488_110--Hb_077562_040 Hb_001488_110--Hb_027445_060 Hb_000184_120 Hb_000184_120 Hb_001488_110--Hb_000184_120 Hb_068946_010 Hb_068946_010 Hb_001488_110--Hb_068946_010 Hb_004025_030 Hb_004025_030 Hb_001488_110--Hb_004025_030 Hb_000563_530 Hb_000563_530 Hb_001488_110--Hb_000563_530 Hb_001095_060--Hb_115919_010 Hb_001095_060--Hb_027445_060 Hb_001095_060--Hb_068946_010 Hb_001095_060--Hb_001488_110 Hb_001310_070 Hb_001310_070 Hb_000122_030--Hb_001310_070 Hb_001057_050 Hb_001057_050 Hb_000122_030--Hb_001057_050 Hb_000122_030--Hb_115919_010 Hb_000003_350 Hb_000003_350 Hb_000122_030--Hb_000003_350 Hb_004117_180 Hb_004117_180 Hb_000122_030--Hb_004117_180 Hb_000122_030--Hb_005305_060 Hb_115919_010--Hb_027445_060 Hb_115919_010--Hb_005305_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.58527 0.0505243 0 0.272136 3.32564 33.8005
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
14.0591 8.55416 3.29081 0.766417 0

CAGE analysis