Hb_000086_330

Information

Type -
Description -
Location Contig86: 263786-270826
Sequence    

Annotation

kegg
ID rcu:RCOM_0259060
description hypothetical protein
nr
ID XP_012085275.1
description PREDICTED: glutathione gamma-glutamylcysteinyltransferase 1 [Jatropha curcas]
swissprot
ID Q2TSC7
description Glutathione gamma-glutamylcysteinyltransferase 1 OS=Lotus japonicus GN=PCS1 PE=2 SV=1
trembl
ID A0A067JRB8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17659 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000086_330 0.0 - - PREDICTED: glutathione gamma-glutamylcysteinyltransferase 1 [Jatropha curcas]
2 Hb_070820_010 0.115091138 - - hypothetical protein B456_008G232800 [Gossypium raimondii]
3 Hb_000445_330 0.1842758215 - - conserved hypothetical protein [Ricinus communis]
4 Hb_002301_240 0.1882719861 - - auxin-repressed protein-like protein ARP1 [Manihot esculenta]
5 Hb_001047_140 0.1945538519 - - -
6 Hb_004502_080 0.2032071261 - - hypothetical protein JCGZ_23578 [Jatropha curcas]
7 Hb_030765_010 0.2119707724 desease resistance Gene Name: ABC_tran PREDICTED: ABC transporter G family member 11-like isoform X1 [Solanum lycopersicum]
8 Hb_042404_010 0.216329445 transcription factor TF Family: GeBP PREDICTED: mediator-associated protein 1-like [Jatropha curcas]
9 Hb_002233_110 0.2175761298 - - PREDICTED: nuclear transcription factor Y subunit B-3-like [Jatropha curcas]
10 Hb_004586_450 0.2180910154 - - -
11 Hb_188382_010 0.2217077917 - - Ran GTPase binding protein, putative [Ricinus communis]
12 Hb_048197_010 0.2236064565 - - -
13 Hb_114839_010 0.2291920009 - - -
14 Hb_010128_110 0.2292751643 - - PREDICTED: uncharacterized protein LOC105632071 [Jatropha curcas]
15 Hb_000048_100 0.2303919172 - - conserved hypothetical protein [Ricinus communis]
16 Hb_019033_010 0.2306620014 - - PREDICTED: uncharacterized protein LOC105643397 [Jatropha curcas]
17 Hb_003057_130 0.2324542197 - - -
18 Hb_000175_040 0.2346828633 - - hypothetical protein JCGZ_06119 [Jatropha curcas]
19 Hb_003398_060 0.2355978572 - - PREDICTED: rRNA methyltransferase 2, mitochondrial isoform X1 [Jatropha curcas]
20 Hb_029982_010 0.2407095176 - - hypothetical protein CICLE_v10006145mg [Citrus clementina]

Gene co-expression network

sample Hb_000086_330 Hb_000086_330 Hb_070820_010 Hb_070820_010 Hb_000086_330--Hb_070820_010 Hb_000445_330 Hb_000445_330 Hb_000086_330--Hb_000445_330 Hb_002301_240 Hb_002301_240 Hb_000086_330--Hb_002301_240 Hb_001047_140 Hb_001047_140 Hb_000086_330--Hb_001047_140 Hb_004502_080 Hb_004502_080 Hb_000086_330--Hb_004502_080 Hb_030765_010 Hb_030765_010 Hb_000086_330--Hb_030765_010 Hb_002821_010 Hb_002821_010 Hb_070820_010--Hb_002821_010 Hb_004098_030 Hb_004098_030 Hb_070820_010--Hb_004098_030 Hb_042404_010 Hb_042404_010 Hb_070820_010--Hb_042404_010 Hb_003398_060 Hb_003398_060 Hb_070820_010--Hb_003398_060 Hb_048197_010 Hb_048197_010 Hb_070820_010--Hb_048197_010 Hb_000445_330--Hb_042404_010 Hb_019033_010 Hb_019033_010 Hb_000445_330--Hb_019033_010 Hb_010128_110 Hb_010128_110 Hb_000445_330--Hb_010128_110 Hb_000445_330--Hb_004502_080 Hb_068804_150 Hb_068804_150 Hb_000445_330--Hb_068804_150 Hb_002301_240--Hb_019033_010 Hb_025246_010 Hb_025246_010 Hb_002301_240--Hb_025246_010 Hb_056196_070 Hb_056196_070 Hb_002301_240--Hb_056196_070 Hb_002835_220 Hb_002835_220 Hb_002301_240--Hb_002835_220 Hb_002301_240--Hb_070820_010 Hb_000331_320 Hb_000331_320 Hb_001047_140--Hb_000331_320 Hb_001864_030 Hb_001864_030 Hb_001047_140--Hb_001864_030 Hb_008667_050 Hb_008667_050 Hb_001047_140--Hb_008667_050 Hb_000453_210 Hb_000453_210 Hb_001047_140--Hb_000453_210 Hb_000331_310 Hb_000331_310 Hb_001047_140--Hb_000331_310 Hb_001047_140--Hb_004502_080 Hb_000175_040 Hb_000175_040 Hb_004502_080--Hb_000175_040 Hb_029888_020 Hb_029888_020 Hb_004502_080--Hb_029888_020 Hb_003057_050 Hb_003057_050 Hb_004502_080--Hb_003057_050 Hb_003057_130 Hb_003057_130 Hb_004502_080--Hb_003057_130 Hb_004502_080--Hb_019033_010 Hb_004502_080--Hb_025246_010 Hb_000048_100 Hb_000048_100 Hb_030765_010--Hb_000048_100 Hb_188382_010 Hb_188382_010 Hb_030765_010--Hb_188382_010 Hb_001186_050 Hb_001186_050 Hb_030765_010--Hb_001186_050 Hb_000348_040 Hb_000348_040 Hb_030765_010--Hb_000348_040 Hb_000736_010 Hb_000736_010 Hb_030765_010--Hb_000736_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.29849 0.0998555 0 0.0529569 0.141585 0.510693
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.959126 0.430941 0 0.0436244 0

CAGE analysis