Hb_000331_310

Information

Type -
Description -
Location Contig331: 263673-264590
Sequence    

Annotation

kegg
ID pop:POPTR_0015s10390g
description POPTRDRAFT_575313; hypothetical protein
nr
ID XP_012079885.1
description PREDICTED: uncharacterized protein LOC105640232 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067K400
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11332 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000331_310 0.0 - - PREDICTED: uncharacterized protein LOC105640232 [Jatropha curcas]
2 Hb_084934_010 0.1230926417 - - hypothetical protein JCGZ_22225 [Jatropha curcas]
3 Hb_002918_280 0.1382038513 - - hypothetical protein POPTR_0004s04800g [Populus trichocarpa]
4 Hb_004607_140 0.1409339941 transcription factor TF Family: AP2 PREDICTED: AP2-like ethylene-responsive transcription factor PLT1 [Populus euphratica]
5 Hb_000163_200 0.1424801737 - - PREDICTED: uncharacterized protein LOC105642527 [Jatropha curcas]
6 Hb_010883_210 0.1445770263 - - PREDICTED: selenoprotein K [Jatropha curcas]
7 Hb_003058_070 0.1456111858 - - PREDICTED: uncharacterized protein LOC105628964 [Jatropha curcas]
8 Hb_003551_020 0.1463476906 - - PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3-like isoform X1 [Jatropha curcas]
9 Hb_003029_080 0.1476013564 - - peptidyl-prolyl cis-trans isomerase, putative [Ricinus communis]
10 Hb_026198_050 0.1476417798 - - PREDICTED: subtilisin-like protease SBT3.3 [Jatropha curcas]
11 Hb_157854_010 0.1497201603 - - PREDICTED: myb family transcription factor APL-like [Jatropha curcas]
12 Hb_028486_040 0.150268318 - - 40S ribosomal protein S14, putative [Ricinus communis]
13 Hb_027472_090 0.1523198875 - - -
14 Hb_118977_020 0.1525576266 - - PREDICTED: uncharacterized protein At3g03773 [Jatropha curcas]
15 Hb_004012_010 0.1529297597 - - PREDICTED: 40S ribosomal protein S15a-1-like [Gossypium raimondii]
16 Hb_001623_330 0.1534411364 - - PREDICTED: uncharacterized protein LOC105638463 [Jatropha curcas]
17 Hb_003185_020 0.1543837156 transcription factor TF Family: GNAT PREDICTED: N-alpha-acetyltransferase 50 [Jatropha curcas]
18 Hb_000045_130 0.1543869633 - - 60S acidic ribosomal protein P0A [Hevea brasiliensis]
19 Hb_006189_010 0.1553623326 - - -
20 Hb_000617_320 0.1578327956 - - 40S ribosomal protein S21B [Hevea brasiliensis]

Gene co-expression network

sample Hb_000331_310 Hb_000331_310 Hb_084934_010 Hb_084934_010 Hb_000331_310--Hb_084934_010 Hb_002918_280 Hb_002918_280 Hb_000331_310--Hb_002918_280 Hb_004607_140 Hb_004607_140 Hb_000331_310--Hb_004607_140 Hb_000163_200 Hb_000163_200 Hb_000331_310--Hb_000163_200 Hb_010883_210 Hb_010883_210 Hb_000331_310--Hb_010883_210 Hb_003058_070 Hb_003058_070 Hb_000331_310--Hb_003058_070 Hb_011472_040 Hb_011472_040 Hb_084934_010--Hb_011472_040 Hb_006189_010 Hb_006189_010 Hb_084934_010--Hb_006189_010 Hb_003086_110 Hb_003086_110 Hb_084934_010--Hb_003086_110 Hb_157854_010 Hb_157854_010 Hb_084934_010--Hb_157854_010 Hb_118977_020 Hb_118977_020 Hb_084934_010--Hb_118977_020 Hb_030312_040 Hb_030312_040 Hb_084934_010--Hb_030312_040 Hb_002918_280--Hb_010883_210 Hb_002918_280--Hb_084934_010 Hb_005031_070 Hb_005031_070 Hb_002918_280--Hb_005031_070 Hb_000221_100 Hb_000221_100 Hb_002918_280--Hb_000221_100 Hb_000680_150 Hb_000680_150 Hb_002918_280--Hb_000680_150 Hb_001386_130 Hb_001386_130 Hb_002918_280--Hb_001386_130 Hb_000272_100 Hb_000272_100 Hb_004607_140--Hb_000272_100 Hb_004607_140--Hb_157854_010 Hb_004204_030 Hb_004204_030 Hb_004607_140--Hb_004204_030 Hb_004607_140--Hb_000163_200 Hb_006824_020 Hb_006824_020 Hb_004607_140--Hb_006824_020 Hb_000732_260 Hb_000732_260 Hb_004607_140--Hb_000732_260 Hb_004242_080 Hb_004242_080 Hb_000163_200--Hb_004242_080 Hb_001951_110 Hb_001951_110 Hb_000163_200--Hb_001951_110 Hb_000163_200--Hb_157854_010 Hb_000417_110 Hb_000417_110 Hb_000163_200--Hb_000417_110 Hb_000479_180 Hb_000479_180 Hb_000163_200--Hb_000479_180 Hb_000768_050 Hb_000768_050 Hb_010883_210--Hb_000768_050 Hb_003106_070 Hb_003106_070 Hb_010883_210--Hb_003106_070 Hb_003688_100 Hb_003688_100 Hb_010883_210--Hb_003688_100 Hb_010449_020 Hb_010449_020 Hb_010883_210--Hb_010449_020 Hb_005489_130 Hb_005489_130 Hb_010883_210--Hb_005489_130 Hb_003058_070--Hb_000417_110 Hb_003001_060 Hb_003001_060 Hb_003058_070--Hb_003001_060 Hb_002234_210 Hb_002234_210 Hb_003058_070--Hb_002234_210 Hb_000190_060 Hb_000190_060 Hb_003058_070--Hb_000190_060 Hb_000365_380 Hb_000365_380 Hb_003058_070--Hb_000365_380 Hb_000798_030 Hb_000798_030 Hb_003058_070--Hb_000798_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
20.0927 17.2234 2.09857 4.61207 29.3354 26.4787
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
42.951 37.4619 7.87738 6.0645 0.99233

CAGE analysis