Hb_000331_320

Information

Type -
Description -
Location Contig331: 264817-265397
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000331_320 0.0 - - -
2 Hb_008667_050 0.1328112619 - - PREDICTED: serine/threonine-protein kinase HT1-like [Malus domestica]
3 Hb_003209_030 0.1541175404 - - PREDICTED: heparanase-like protein 2 [Jatropha curcas]
4 Hb_001047_140 0.1587862202 - - -
5 Hb_005690_020 0.1648470836 - - hypothetical protein POPTR_0006s08200g [Populus trichocarpa]
6 Hb_000529_240 0.1848131565 - - -
7 Hb_000453_210 0.1993140727 - - hypothetical protein PHAVU_006G019800g [Phaseolus vulgaris]
8 Hb_080147_090 0.2203108711 - - hypothetical protein JCGZ_07271 [Jatropha curcas]
9 Hb_001495_060 0.223250428 - - PREDICTED: probable aldo-keto reductase 1 [Jatropha curcas]
10 Hb_004680_020 0.2249358832 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC105789475 [Gossypium raimondii]
11 Hb_075653_020 0.2285981627 - - -
12 Hb_056768_010 0.2301974975 - - PREDICTED: serine/threonine-protein kinase HT1 isoform X1 [Cicer arietinum]
13 Hb_005009_020 0.2328620177 - - -
14 Hb_001017_120 0.2375617999 - - -
15 Hb_048197_010 0.2399293131 - - -
16 Hb_000331_310 0.2430884236 - - PREDICTED: uncharacterized protein LOC105640232 [Jatropha curcas]
17 Hb_004586_450 0.2435748882 - - -
18 Hb_004502_080 0.244247731 - - hypothetical protein JCGZ_23578 [Jatropha curcas]
19 Hb_001864_030 0.2468197589 - - thioredoxin h [Hevea brasiliensis]
20 Hb_002471_160 0.2487766101 transcription factor TF Family: C2H2 PREDICTED: zinc finger protein 4-like [Populus euphratica]

Gene co-expression network

sample Hb_000331_320 Hb_000331_320 Hb_008667_050 Hb_008667_050 Hb_000331_320--Hb_008667_050 Hb_003209_030 Hb_003209_030 Hb_000331_320--Hb_003209_030 Hb_001047_140 Hb_001047_140 Hb_000331_320--Hb_001047_140 Hb_005690_020 Hb_005690_020 Hb_000331_320--Hb_005690_020 Hb_000529_240 Hb_000529_240 Hb_000331_320--Hb_000529_240 Hb_000453_210 Hb_000453_210 Hb_000331_320--Hb_000453_210 Hb_008667_050--Hb_001047_140 Hb_008667_050--Hb_000453_210 Hb_008667_050--Hb_003209_030 Hb_008667_050--Hb_005690_020 Hb_008667_050--Hb_000529_240 Hb_003209_030--Hb_000453_210 Hb_003209_030--Hb_000529_240 Hb_001495_060 Hb_001495_060 Hb_003209_030--Hb_001495_060 Hb_003209_030--Hb_001047_140 Hb_001864_030 Hb_001864_030 Hb_001047_140--Hb_001864_030 Hb_001047_140--Hb_000453_210 Hb_000331_310 Hb_000331_310 Hb_001047_140--Hb_000331_310 Hb_004502_080 Hb_004502_080 Hb_001047_140--Hb_004502_080 Hb_080147_090 Hb_080147_090 Hb_005690_020--Hb_080147_090 Hb_005690_020--Hb_000331_310 Hb_002821_010 Hb_002821_010 Hb_005690_020--Hb_002821_010 Hb_073973_110 Hb_073973_110 Hb_005690_020--Hb_073973_110 Hb_000529_240--Hb_001495_060 Hb_000529_240--Hb_001047_140 Hb_000529_240--Hb_000453_210 Hb_001143_010 Hb_001143_010 Hb_000453_210--Hb_001143_010 Hb_000453_210--Hb_001495_060 Hb_002685_180 Hb_002685_180 Hb_000453_210--Hb_002685_180
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.06533 2.5843 0 0 3.25771 4.08699
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
12.0652 8.24834 0.568608 1.82899 0

CAGE analysis