Hb_078804_010

Information

Type -
Description -
Location Contig78804: 26-1675
Sequence    

Annotation

kegg
ID rcu:RCOM_0231810
description kinase, putative (EC:2.7.10.1)
nr
ID XP_002527242.1
description kinase, putative [Ricinus communis]
swissprot
ID Q9LXA5
description L-type lectin-domain containing receptor kinase IX.1 OS=Arabidopsis thaliana GN=LECRK91 PE=2 SV=1
trembl
ID B9SMM3
description Kinase, putative OS=Ricinus communis GN=RCOM_0231810 PE=3 SV=1
Gene Ontology
ID GO:0004674
description l-type lectin-domain containing receptor kinase -like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_078804_010 0.0 - - kinase, putative [Ricinus communis]
2 Hb_001277_060 0.1816559412 - - ADP-ribosylation factor-like protein 5 [Morus notabilis]
3 Hb_009178_050 0.2360068416 - - Elongation factor 1-alpha, putative [Ricinus communis]
4 Hb_001633_190 0.2895453628 - - PREDICTED: probable methyltransferase PMT11 [Jatropha curcas]
5 Hb_000614_310 0.2944040343 - - conserved hypothetical protein [Ricinus communis]
6 Hb_001864_090 0.2984939589 - - -
7 Hb_000946_160 0.3017228803 transcription factor TF Family: GNAT PREDICTED: uncharacterized N-acetyltransferase ycf52 [Jatropha curcas]
8 Hb_001248_120 0.3032915668 - - conserved hypothetical protein [Ricinus communis]
9 Hb_001979_030 0.3100734681 - - hypothetical protein POPTR_0016s06130g [Populus trichocarpa]
10 Hb_052640_010 0.3179288855 - - PREDICTED: putative quinone-oxidoreductase homolog, chloroplastic [Jatropha curcas]
11 Hb_003996_030 0.319973783 - - -
12 Hb_001514_260 0.3205055032 - - -
13 Hb_033153_080 0.3213797695 - - PREDICTED: anthocyanidin 3-O-glucoside 2''-O-glucosyltransferase-like [Populus euphratica]
14 Hb_002686_100 0.333643884 - - -
15 Hb_000753_270 0.3336826739 - - -
16 Hb_000603_010 0.3360076223 - - PREDICTED: transmembrane protein 87A-like [Nelumbo nucifera]
17 Hb_094529_020 0.3367917983 - - leucine-rich repeat containing protein, putative [Ricinus communis]
18 Hb_000160_050 0.3379519752 - - hypothetical protein JCGZ_02516 [Jatropha curcas]
19 Hb_000069_290 0.3397448653 - - hypothetical protein POPTR_0014s09500g [Populus trichocarpa]
20 Hb_000577_060 0.3403604783 - - -

Gene co-expression network

sample Hb_078804_010 Hb_078804_010 Hb_001277_060 Hb_001277_060 Hb_078804_010--Hb_001277_060 Hb_009178_050 Hb_009178_050 Hb_078804_010--Hb_009178_050 Hb_001633_190 Hb_001633_190 Hb_078804_010--Hb_001633_190 Hb_000614_310 Hb_000614_310 Hb_078804_010--Hb_000614_310 Hb_001864_090 Hb_001864_090 Hb_078804_010--Hb_001864_090 Hb_000946_160 Hb_000946_160 Hb_078804_010--Hb_000946_160 Hb_001277_060--Hb_009178_050 Hb_001277_060--Hb_000614_310 Hb_001248_120 Hb_001248_120 Hb_001277_060--Hb_001248_120 Hb_033153_080 Hb_033153_080 Hb_001277_060--Hb_033153_080 Hb_001514_260 Hb_001514_260 Hb_001277_060--Hb_001514_260 Hb_009178_050--Hb_001248_120 Hb_000179_120 Hb_000179_120 Hb_009178_050--Hb_000179_120 Hb_000345_060 Hb_000345_060 Hb_009178_050--Hb_000345_060 Hb_009178_050--Hb_000614_310 Hb_052640_010 Hb_052640_010 Hb_001633_190--Hb_052640_010 Hb_004947_010 Hb_004947_010 Hb_001633_190--Hb_004947_010 Hb_001633_190--Hb_033153_080 Hb_016875_010 Hb_016875_010 Hb_001633_190--Hb_016875_010 Hb_002686_100 Hb_002686_100 Hb_001633_190--Hb_002686_100 Hb_094529_020 Hb_094529_020 Hb_001633_190--Hb_094529_020 Hb_000753_270 Hb_000753_270 Hb_000614_310--Hb_000753_270 Hb_000069_290 Hb_000069_290 Hb_000614_310--Hb_000069_290 Hb_000577_060 Hb_000577_060 Hb_000614_310--Hb_000577_060 Hb_000170_180 Hb_000170_180 Hb_000614_310--Hb_000170_180 Hb_054581_010 Hb_054581_010 Hb_000614_310--Hb_054581_010 Hb_001864_090--Hb_000946_160 Hb_001922_180 Hb_001922_180 Hb_001864_090--Hb_001922_180 Hb_005489_010 Hb_005489_010 Hb_001864_090--Hb_005489_010 Hb_003206_100 Hb_003206_100 Hb_001864_090--Hb_003206_100 Hb_002025_210 Hb_002025_210 Hb_001864_090--Hb_002025_210 Hb_021888_040 Hb_021888_040 Hb_001864_090--Hb_021888_040 Hb_000946_160--Hb_021888_040 Hb_003996_030 Hb_003996_030 Hb_000946_160--Hb_003996_030 Hb_000243_370 Hb_000243_370 Hb_000946_160--Hb_000243_370 Hb_000261_170 Hb_000261_170 Hb_000946_160--Hb_000261_170 Hb_000946_160--Hb_003206_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0.147112 0.0129641 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0294651 0.0231816 0 0.00924693 0

CAGE analysis