Hb_000614_310

Information

Type -
Description -
Location Contig614: 226085-231237
Sequence    

Annotation

kegg
ID fve:101291889
description vinorine synthase-like
nr
ID XP_002511240.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9RAL5
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1507250 PE=4 SV=1
Gene Ontology
ID GO:0047180
description bahd acyltransferase at5g47980-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000614_310 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_000753_270 0.1638080392 - - -
3 Hb_000069_290 0.1756065869 - - hypothetical protein POPTR_0014s09500g [Populus trichocarpa]
4 Hb_000577_060 0.1813262151 - - -
5 Hb_000170_180 0.1953624829 - - PREDICTED: uncharacterized protein LOC105109433 [Populus euphratica]
6 Hb_054581_010 0.198189577 - - Type I inositol-1,4,5-trisphosphate 5-phosphatase CVP2 [Theobroma cacao]
7 Hb_001277_060 0.2193355682 - - ADP-ribosylation factor-like protein 5 [Morus notabilis]
8 Hb_004308_010 0.2231401515 - - hypothetical protein CISIN_1g0004672mg, partial [Citrus sinensis]
9 Hb_000188_080 0.2433881199 - - PREDICTED: uncharacterized protein LOC105629484 [Jatropha curcas]
10 Hb_000181_370 0.2485546561 - - conserved hypothetical protein [Ricinus communis]
11 Hb_000367_110 0.2572111742 - - PREDICTED: monodehydroascorbate reductase, chloroplastic isoform X1 [Sesamum indicum]
12 Hb_002192_040 0.2595841214 - - -
13 Hb_009178_050 0.2707036524 - - Elongation factor 1-alpha, putative [Ricinus communis]
14 Hb_003207_050 0.2724000489 - - PREDICTED: cucumisin-like [Jatropha curcas]
15 Hb_078804_010 0.2944040343 - - kinase, putative [Ricinus communis]
16 Hb_041188_010 0.2944618474 - - PREDICTED: O-acyltransferase WSD1-like [Nicotiana tomentosiformis]
17 Hb_025526_110 0.2945143019 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 [Jatropha curcas]
18 Hb_020712_020 0.2948187949 transcription factor TF Family: SET PREDICTED: histone-lysine N-methyltransferase ATX4 [Elaeis guineensis]
19 Hb_000355_020 0.2953927767 - - -
20 Hb_001278_010 0.2955820733 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_000614_310 Hb_000614_310 Hb_000753_270 Hb_000753_270 Hb_000614_310--Hb_000753_270 Hb_000069_290 Hb_000069_290 Hb_000614_310--Hb_000069_290 Hb_000577_060 Hb_000577_060 Hb_000614_310--Hb_000577_060 Hb_000170_180 Hb_000170_180 Hb_000614_310--Hb_000170_180 Hb_054581_010 Hb_054581_010 Hb_000614_310--Hb_054581_010 Hb_001277_060 Hb_001277_060 Hb_000614_310--Hb_001277_060 Hb_000753_270--Hb_000069_290 Hb_000753_270--Hb_054581_010 Hb_000753_270--Hb_000577_060 Hb_004308_010 Hb_004308_010 Hb_000753_270--Hb_004308_010 Hb_027450_020 Hb_027450_020 Hb_000753_270--Hb_027450_020 Hb_000069_290--Hb_054581_010 Hb_000069_290--Hb_000577_060 Hb_000069_290--Hb_004308_010 Hb_000069_290--Hb_027450_020 Hb_000577_060--Hb_004308_010 Hb_000188_080 Hb_000188_080 Hb_000577_060--Hb_000188_080 Hb_000577_060--Hb_054581_010 Hb_087388_010 Hb_087388_010 Hb_000170_180--Hb_087388_010 Hb_000347_520 Hb_000347_520 Hb_000170_180--Hb_000347_520 Hb_000367_110 Hb_000367_110 Hb_000170_180--Hb_000367_110 Hb_001195_670 Hb_001195_670 Hb_000170_180--Hb_001195_670 Hb_000170_180--Hb_004308_010 Hb_054581_010--Hb_027450_020 Hb_009486_110 Hb_009486_110 Hb_054581_010--Hb_009486_110 Hb_009178_050 Hb_009178_050 Hb_001277_060--Hb_009178_050 Hb_078804_010 Hb_078804_010 Hb_001277_060--Hb_078804_010 Hb_001248_120 Hb_001248_120 Hb_001277_060--Hb_001248_120 Hb_033153_080 Hb_033153_080 Hb_001277_060--Hb_033153_080 Hb_001514_260 Hb_001514_260 Hb_001277_060--Hb_001514_260
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0.292706 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0607369 0 0 0.0192819 0

CAGE analysis