Hb_000188_080

Information

Type -
Description -
Location Contig188: 124456-124686
Sequence    

Annotation

kegg
ID rcu:RCOM_0516380
description hypothetical protein
nr
ID XP_012066482.1
description PREDICTED: uncharacterized protein LOC105629484 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L2W9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23672 PE=4 SV=1
Gene Ontology
ID GO:0005634
description PREDICTED: uncharacterized protein LOC105629484

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000188_080 0.0 - - PREDICTED: uncharacterized protein LOC105629484 [Jatropha curcas]
2 Hb_003333_070 0.1266439871 - - Ent-kaurenoic acid oxidase, putative [Ricinus communis]
3 Hb_008535_020 0.1407636572 transcription factor TF Family: bHLH basic helix-loop-helix family protein [Populus trichocarpa]
4 Hb_000325_090 0.1509208787 transcription factor TF Family: bHLH PREDICTED: transcription factor PRE5-like [Gossypium raimondii]
5 Hb_001247_050 0.1572117809 - - PREDICTED: WAT1-related protein At1g09380 [Jatropha curcas]
6 Hb_004308_010 0.1658805809 - - hypothetical protein CISIN_1g0004672mg, partial [Citrus sinensis]
7 Hb_000566_060 0.1660223451 - - conserved hypothetical protein [Ricinus communis]
8 Hb_003729_040 0.1665084398 - - o-methyltransferase, putative [Ricinus communis]
9 Hb_069237_010 0.1665118108 - - -
10 Hb_005015_090 0.1665875652 - - PREDICTED: cytochrome P450 78A7 [Jatropha curcas]
11 Hb_130357_010 0.1666303216 - - PREDICTED: putative receptor-like protein kinase At3g47110 [Jatropha curcas]
12 Hb_000270_590 0.1671648445 - - hypothetical protein POPTR_0012s07820g [Populus trichocarpa]
13 Hb_000258_010 0.1671723518 - - lipid transfer precursor protein [Hevea brasiliensis]
14 Hb_001347_020 0.167391781 - - PREDICTED: cytochrome P450 86B1-like [Populus euphratica]
15 Hb_000422_100 0.1675265667 - - PREDICTED: TMV resistance protein N-like [Populus euphratica]
16 Hb_000645_040 0.1675571021 transcription factor TF Family: GNAT N-acetyltransferase, putative [Ricinus communis]
17 Hb_005976_030 0.1676971775 - - PREDICTED: uncharacterized protein LOC105639715 [Jatropha curcas]
18 Hb_111442_010 0.1678607194 desease resistance Gene Name: AAA_16 LRR and NB-ARC domains-containing disease resistance protein, putative [Theobroma cacao]
19 Hb_000224_070 0.1680897121 - - -
20 Hb_000628_090 0.1686364402 - - hypothetical protein B456_010G019400 [Gossypium raimondii]

Gene co-expression network

sample Hb_000188_080 Hb_000188_080 Hb_003333_070 Hb_003333_070 Hb_000188_080--Hb_003333_070 Hb_008535_020 Hb_008535_020 Hb_000188_080--Hb_008535_020 Hb_000325_090 Hb_000325_090 Hb_000188_080--Hb_000325_090 Hb_001247_050 Hb_001247_050 Hb_000188_080--Hb_001247_050 Hb_004308_010 Hb_004308_010 Hb_000188_080--Hb_004308_010 Hb_000566_060 Hb_000566_060 Hb_000188_080--Hb_000566_060 Hb_005015_090 Hb_005015_090 Hb_003333_070--Hb_005015_090 Hb_002309_030 Hb_002309_030 Hb_003333_070--Hb_002309_030 Hb_003333_070--Hb_004308_010 Hb_003333_070--Hb_008535_020 Hb_005914_190 Hb_005914_190 Hb_003333_070--Hb_005914_190 Hb_008535_020--Hb_001247_050 Hb_001277_390 Hb_001277_390 Hb_008535_020--Hb_001277_390 Hb_118941_010 Hb_118941_010 Hb_008535_020--Hb_118941_010 Hb_000224_070 Hb_000224_070 Hb_008535_020--Hb_000224_070 Hb_002701_200 Hb_002701_200 Hb_008535_020--Hb_002701_200 Hb_005976_030 Hb_005976_030 Hb_008535_020--Hb_005976_030 Hb_000258_010 Hb_000258_010 Hb_000325_090--Hb_000258_010 Hb_000325_090--Hb_005976_030 Hb_069237_010 Hb_069237_010 Hb_000325_090--Hb_069237_010 Hb_001892_040 Hb_001892_040 Hb_000325_090--Hb_001892_040 Hb_003729_040 Hb_003729_040 Hb_000325_090--Hb_003729_040 Hb_001591_020 Hb_001591_020 Hb_000325_090--Hb_001591_020 Hb_001247_050--Hb_001277_390 Hb_001247_050--Hb_000224_070 Hb_001247_050--Hb_118941_010 Hb_120496_010 Hb_120496_010 Hb_001247_050--Hb_120496_010 Hb_001247_050--Hb_069237_010 Hb_000577_060 Hb_000577_060 Hb_004308_010--Hb_000577_060 Hb_000753_270 Hb_000753_270 Hb_004308_010--Hb_000753_270 Hb_004308_010--Hb_002309_030 Hb_010866_020 Hb_010866_020 Hb_004308_010--Hb_010866_020 Hb_004317_020 Hb_004317_020 Hb_000566_060--Hb_004317_020 Hb_034858_010 Hb_034858_010 Hb_000566_060--Hb_034858_010 Hb_010068_010 Hb_010068_010 Hb_000566_060--Hb_010068_010 Hb_051900_020 Hb_051900_020 Hb_000566_060--Hb_051900_020 Hb_000926_240 Hb_000926_240 Hb_000566_060--Hb_000926_240 Hb_160479_010 Hb_160479_010 Hb_000566_060--Hb_160479_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.789954 18.7663 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.817033 0 0 0.30671 0

CAGE analysis