Hb_000258_010

Information

Type -
Description -
Location Contig258: 2114-2458
Sequence    

Annotation

kegg
ID cic:CICLE_v10012953mg
description hypothetical protein
nr
ID AAL25839.1
description lipid transfer precursor protein [Hevea brasiliensis]
swissprot
ID Q9M5X7
description Non-specific lipid-transfer protein OS=Malus domestica GN=MALD3 PE=1 SV=1
trembl
ID Q8RYA8
description Non-specific lipid-transfer protein OS=Hevea brasiliensis PE=2 SV=1
Gene Ontology
ID GO:0008289
description non-specific lipid-transfer

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000258_010 0.0 - - lipid transfer precursor protein [Hevea brasiliensis]
2 Hb_005976_030 0.0050563351 - - PREDICTED: uncharacterized protein LOC105639715 [Jatropha curcas]
3 Hb_069237_010 0.0123246282 - - -
4 Hb_001892_040 0.0179290414 transcription factor TF Family: HB Protein WUSCHEL, putative [Ricinus communis]
5 Hb_003729_040 0.0181859677 - - o-methyltransferase, putative [Ricinus communis]
6 Hb_130357_010 0.0224023707 - - PREDICTED: putative receptor-like protein kinase At3g47110 [Jatropha curcas]
7 Hb_001591_020 0.0230817109 transcription factor TF Family: bHLH basic helix-loop-helix family protein [Populus trichocarpa]
8 Hb_000733_170 0.0289523874 transcription factor TF Family: HB bel1 homeotic protein, putative [Ricinus communis]
9 Hb_000530_080 0.0322945119 - - PREDICTED: serine/threonine-protein kinase D6PKL2-like [Jatropha curcas]
10 Hb_001347_020 0.0329732228 - - PREDICTED: cytochrome P450 86B1-like [Populus euphratica]
11 Hb_004032_170 0.0341139729 - - PREDICTED: indole-3-acetic acid-induced protein ARG7 [Jatropha curcas]
12 Hb_000422_100 0.0342403801 - - PREDICTED: TMV resistance protein N-like [Populus euphratica]
13 Hb_007432_040 0.0348657771 transcription factor TF Family: bHLH PREDICTED: transcription factor BEE 3-like [Jatropha curcas]
14 Hb_111442_010 0.0370684211 desease resistance Gene Name: AAA_16 LRR and NB-ARC domains-containing disease resistance protein, putative [Theobroma cacao]
15 Hb_000628_090 0.0425358941 - - hypothetical protein B456_010G019400 [Gossypium raimondii]
16 Hb_054865_110 0.043791825 - - conserved hypothetical protein [Ricinus communis]
17 Hb_000194_040 0.0442567616 - - carbonic anhydrase, putative [Ricinus communis]
18 Hb_000325_090 0.0457299921 transcription factor TF Family: bHLH PREDICTED: transcription factor PRE5-like [Gossypium raimondii]
19 Hb_153199_010 0.0458803424 - - -
20 Hb_000389_130 0.0535985295 - - Dehydration-responsive protein RD22 precursor, putative [Ricinus communis]

Gene co-expression network

sample Hb_000258_010 Hb_000258_010 Hb_005976_030 Hb_005976_030 Hb_000258_010--Hb_005976_030 Hb_069237_010 Hb_069237_010 Hb_000258_010--Hb_069237_010 Hb_001892_040 Hb_001892_040 Hb_000258_010--Hb_001892_040 Hb_003729_040 Hb_003729_040 Hb_000258_010--Hb_003729_040 Hb_130357_010 Hb_130357_010 Hb_000258_010--Hb_130357_010 Hb_001591_020 Hb_001591_020 Hb_000258_010--Hb_001591_020 Hb_005976_030--Hb_001892_040 Hb_005976_030--Hb_069237_010 Hb_005976_030--Hb_001591_020 Hb_005976_030--Hb_003729_040 Hb_000733_170 Hb_000733_170 Hb_005976_030--Hb_000733_170 Hb_069237_010--Hb_003729_040 Hb_069237_010--Hb_130357_010 Hb_001347_020 Hb_001347_020 Hb_069237_010--Hb_001347_020 Hb_000422_100 Hb_000422_100 Hb_069237_010--Hb_000422_100 Hb_001892_040--Hb_001591_020 Hb_001892_040--Hb_000733_170 Hb_000530_080 Hb_000530_080 Hb_001892_040--Hb_000530_080 Hb_004032_170 Hb_004032_170 Hb_001892_040--Hb_004032_170 Hb_007432_040 Hb_007432_040 Hb_001892_040--Hb_007432_040 Hb_003729_040--Hb_130357_010 Hb_003729_040--Hb_001347_020 Hb_003729_040--Hb_000422_100 Hb_111442_010 Hb_111442_010 Hb_003729_040--Hb_111442_010 Hb_130357_010--Hb_001347_020 Hb_130357_010--Hb_000422_100 Hb_130357_010--Hb_111442_010 Hb_000628_090 Hb_000628_090 Hb_130357_010--Hb_000628_090 Hb_001591_020--Hb_000733_170 Hb_001591_020--Hb_000530_080 Hb_001591_020--Hb_004032_170 Hb_001591_020--Hb_007432_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.363953 10.476 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis