Hb_000926_240

Information

Type -
Description -
Location Contig926: 257800-258018
Sequence    

Annotation

kegg
ID pper:PRUPE_ppb018041mg
description hypothetical protein
nr
ID XP_007216582.1
description hypothetical protein PRUPE_ppb018041mg [Prunus persica]
swissprot
ID -
description -
trembl
ID M5WX23
description Uncharacterized protein OS=Prunus persica GN=PRUPE_ppb018041mg PE=4 SV=1
Gene Ontology
ID GO:0006259
description condensin complex subunit isoform 2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_62685: 253450-258084 , PASA_asmbl_62686: 257293-257826 , PASA_asmbl_62688: 258711-264234
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000926_240 0.0 - - hypothetical protein PRUPE_ppb018041mg [Prunus persica]
2 Hb_010068_010 0.0291161912 - - PREDICTED: uncharacterized protein LOC105633273 [Jatropha curcas]
3 Hb_160479_010 0.0440037514 - - hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis]
4 Hb_000935_060 0.059794054 - - PREDICTED: 1-aminocyclopropane-1-carboxylate synthase 8-like [Jatropha curcas]
5 Hb_004102_150 0.0625249461 - - Late embryogenesis abundant protein D-7, putative [Ricinus communis]
6 Hb_004317_020 0.0652148116 - - PREDICTED: protein CHROMOSOME TRANSMISSION FIDELITY 7-like [Malus domestica]
7 Hb_034858_010 0.0712326667 - - -
8 Hb_033691_010 0.0768325738 - - Lignin-forming anionic peroxidase precursor, putative [Ricinus communis]
9 Hb_000566_060 0.0781736463 - - conserved hypothetical protein [Ricinus communis]
10 Hb_005348_020 0.0871300654 - - conserved hypothetical protein [Ricinus communis]
11 Hb_051900_020 0.0916683443 - - JHL22C18.7 [Jatropha curcas]
12 Hb_000740_140 0.0939180175 transcription factor TF Family: OFP PREDICTED: probable transcription repressor OFP9 [Jatropha curcas]
13 Hb_000917_070 0.1091766907 - - conserved hypothetical protein [Ricinus communis]
14 Hb_001369_510 0.116975792 - - PREDICTED: uncharacterized protein LOC105766768 [Gossypium raimondii]
15 Hb_005144_140 0.119434191 - - conserved hypothetical protein [Ricinus communis]
16 Hb_002235_330 0.1267053589 - - PREDICTED: expansin-A1 isoform X1 [Jatropha curcas]
17 Hb_100953_010 0.1287124244 - - hypothetical protein JCGZ_10310 [Jatropha curcas]
18 Hb_007138_010 0.1378965683 - - PREDICTED: putative laccase-9 [Jatropha curcas]
19 Hb_011609_200 0.1453531818 - - PREDICTED: ultraviolet-B receptor UVR8-like isoform X3 [Populus euphratica]
20 Hb_073870_010 0.1473791598 - - hypothetical protein RCOM_0725510 [Ricinus communis]

Gene co-expression network

sample Hb_000926_240 Hb_000926_240 Hb_010068_010 Hb_010068_010 Hb_000926_240--Hb_010068_010 Hb_160479_010 Hb_160479_010 Hb_000926_240--Hb_160479_010 Hb_000935_060 Hb_000935_060 Hb_000926_240--Hb_000935_060 Hb_004102_150 Hb_004102_150 Hb_000926_240--Hb_004102_150 Hb_004317_020 Hb_004317_020 Hb_000926_240--Hb_004317_020 Hb_034858_010 Hb_034858_010 Hb_000926_240--Hb_034858_010 Hb_010068_010--Hb_160479_010 Hb_033691_010 Hb_033691_010 Hb_010068_010--Hb_033691_010 Hb_010068_010--Hb_004317_020 Hb_051900_020 Hb_051900_020 Hb_010068_010--Hb_051900_020 Hb_000566_060 Hb_000566_060 Hb_010068_010--Hb_000566_060 Hb_160479_010--Hb_033691_010 Hb_160479_010--Hb_051900_020 Hb_160479_010--Hb_004317_020 Hb_160479_010--Hb_000935_060 Hb_000935_060--Hb_004102_150 Hb_000917_070 Hb_000917_070 Hb_000935_060--Hb_000917_070 Hb_005144_140 Hb_005144_140 Hb_000935_060--Hb_005144_140 Hb_000935_060--Hb_010068_010 Hb_004102_150--Hb_000917_070 Hb_004102_150--Hb_005144_140 Hb_004102_150--Hb_010068_010 Hb_005348_020 Hb_005348_020 Hb_004102_150--Hb_005348_020 Hb_004317_020--Hb_000566_060 Hb_004317_020--Hb_034858_010 Hb_004317_020--Hb_051900_020 Hb_034858_010--Hb_000566_060 Hb_000740_140 Hb_000740_140 Hb_034858_010--Hb_000740_140 Hb_034858_010--Hb_005348_020 Hb_034858_010--Hb_010068_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 1.1127 9.03496 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.750632 0

CAGE analysis