Hb_000740_140

Information

Type transcription factor
Description TF Family: OFP
Location Contig740: 144740-146353
Sequence    

Annotation

kegg
ID tcc:TCM_030311
description hypothetical protein
nr
ID XP_012067125.1
description PREDICTED: probable transcription repressor OFP9 [Jatropha curcas]
swissprot
ID P0DKG3
description Probable transcription repressor OFP9 OS=Arabidopsis thaliana GN=OFP9 PE=3 SV=1
trembl
ID A0A067LC45
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01853 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000740_140 0.0 transcription factor TF Family: OFP PREDICTED: probable transcription repressor OFP9 [Jatropha curcas]
2 Hb_005348_020 0.0237079209 - - conserved hypothetical protein [Ricinus communis]
3 Hb_034858_010 0.0537071284 - - -
4 Hb_004317_020 0.0895976639 - - PREDICTED: protein CHROMOSOME TRANSMISSION FIDELITY 7-like [Malus domestica]
5 Hb_000926_240 0.0939180175 - - hypothetical protein PRUPE_ppb018041mg [Prunus persica]
6 Hb_000566_060 0.1030481856 - - conserved hypothetical protein [Ricinus communis]
7 Hb_000917_070 0.104114017 - - conserved hypothetical protein [Ricinus communis]
8 Hb_004102_150 0.1075425698 - - Late embryogenesis abundant protein D-7, putative [Ricinus communis]
9 Hb_010068_010 0.1155854391 - - PREDICTED: uncharacterized protein LOC105633273 [Jatropha curcas]
10 Hb_000935_060 0.1164389575 - - PREDICTED: 1-aminocyclopropane-1-carboxylate synthase 8-like [Jatropha curcas]
11 Hb_005144_140 0.1210168228 - - conserved hypothetical protein [Ricinus communis]
12 Hb_003494_100 0.1274885691 transcription factor TF Family: zf-HD Mini zinc finger 2 isoform 1 [Theobroma cacao]
13 Hb_093084_040 0.1286577783 transcription factor TF Family: LOB hypothetical protein POPTR_0015s09370g [Populus trichocarpa]
14 Hb_160479_010 0.135142097 - - hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis]
15 Hb_000269_050 0.1442113918 - - PREDICTED: beta-glucosidase 12-like [Gossypium raimondii]
16 Hb_003058_090 0.1442654099 - - hypothetical protein POPTR_0001s28080g [Populus trichocarpa]
17 Hb_000194_030 0.1450224768 transcription factor TF Family: NAC NAC transcription factor 059 [Jatropha curcas]
18 Hb_159012_010 0.1458030203 - - PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At5g06940 [Jatropha curcas]
19 Hb_004926_010 0.1473171002 - - hypothetical protein JCGZ_27059 [Jatropha curcas]
20 Hb_000622_140 0.1482936977 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_000740_140 Hb_000740_140 Hb_005348_020 Hb_005348_020 Hb_000740_140--Hb_005348_020 Hb_034858_010 Hb_034858_010 Hb_000740_140--Hb_034858_010 Hb_004317_020 Hb_004317_020 Hb_000740_140--Hb_004317_020 Hb_000926_240 Hb_000926_240 Hb_000740_140--Hb_000926_240 Hb_000566_060 Hb_000566_060 Hb_000740_140--Hb_000566_060 Hb_000917_070 Hb_000917_070 Hb_000740_140--Hb_000917_070 Hb_005348_020--Hb_034858_010 Hb_005348_020--Hb_000917_070 Hb_005348_020--Hb_000926_240 Hb_004102_150 Hb_004102_150 Hb_005348_020--Hb_004102_150 Hb_005144_140 Hb_005144_140 Hb_005348_020--Hb_005144_140 Hb_034858_010--Hb_004317_020 Hb_034858_010--Hb_000566_060 Hb_034858_010--Hb_000926_240 Hb_010068_010 Hb_010068_010 Hb_034858_010--Hb_010068_010 Hb_004317_020--Hb_000566_060 Hb_004317_020--Hb_010068_010 Hb_004317_020--Hb_000926_240 Hb_160479_010 Hb_160479_010 Hb_004317_020--Hb_160479_010 Hb_051900_020 Hb_051900_020 Hb_004317_020--Hb_051900_020 Hb_000926_240--Hb_010068_010 Hb_000926_240--Hb_160479_010 Hb_000935_060 Hb_000935_060 Hb_000926_240--Hb_000935_060 Hb_000926_240--Hb_004102_150 Hb_000566_060--Hb_010068_010 Hb_000566_060--Hb_051900_020 Hb_000566_060--Hb_000926_240 Hb_000566_060--Hb_160479_010 Hb_000917_070--Hb_005144_140 Hb_000917_070--Hb_004102_150 Hb_000917_070--Hb_000935_060 Hb_006275_040 Hb_006275_040 Hb_000917_070--Hb_006275_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0411408 0.776562 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0762885 0

CAGE analysis