Hb_005015_090

Information

Type -
Description -
Location Contig5015: 66466-68141
Sequence    

Annotation

kegg
ID rcu:RCOM_0209990
description cytochrome P450, putative (EC:1.14.13.88)
nr
ID XP_012075225.1
description PREDICTED: cytochrome P450 78A7 [Jatropha curcas]
swissprot
ID Q9FIB0
description Cytochrome P450 78A7 OS=Arabidopsis thaliana GN=CYP78A7 PE=2 SV=1
trembl
ID A0A067KGM8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09401 PE=3 SV=1
Gene Ontology
ID GO:0005506
description cytochrome p450 78a7-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_45863: 66389-66876 , PASA_asmbl_45864: 66933-67375
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005015_090 0.0 - - PREDICTED: cytochrome P450 78A7 [Jatropha curcas]
2 Hb_000115_210 0.0933619186 transcription factor TF Family: bHLH PREDICTED: transcription factor BEE 3-like [Jatropha curcas]
3 Hb_000431_040 0.1106576118 - - PREDICTED: uncharacterized protein LOC105635551 [Jatropha curcas]
4 Hb_000431_050 0.1151052455 - - conserved hypothetical protein [Ricinus communis]
5 Hb_002757_020 0.1157746013 - - -
6 Hb_000352_210 0.1189513711 - - PREDICTED: xyloglucan endotransglucosylase/hydrolase 1 [Jatropha curcas]
7 Hb_000331_380 0.1203549465 - - hypothetical protein POPTR_0012s09560g [Populus trichocarpa]
8 Hb_085158_010 0.1210835052 transcription factor TF Family: C2H2 TRANSPARENT TESTA 1 protein, putative [Ricinus communis]
9 Hb_000375_210 0.1218852982 - - -
10 Hb_000392_080 0.1247509414 - - hypothetical protein glysoja_034865 [Glycine soja]
11 Hb_015183_090 0.1273519074 - - PREDICTED: 3-ketoacyl-CoA synthase 21-like [Jatropha curcas]
12 Hb_005539_330 0.1278375123 - - PREDICTED: WAT1-related protein At2g39510-like [Jatropha curcas]
13 Hb_004162_150 0.1282507501 - - hypothetical protein POPTR_0009s00870g [Populus trichocarpa]
14 Hb_000389_120 0.1333955454 - - hypothetical protein JCGZ_20066 [Jatropha curcas]
15 Hb_003333_070 0.1354287165 - - Ent-kaurenoic acid oxidase, putative [Ricinus communis]
16 Hb_006603_010 0.1383636744 - - neutral alpha-glucosidase ab precursor, putative [Ricinus communis]
17 Hb_151436_010 0.1384256162 - - PREDICTED: uncharacterized protein LOC105137019 [Populus euphratica]
18 Hb_002028_250 0.1391365124 - - Alpha-aminoadipic semialdehyde synthase, mitochondrial [Crassostrea gigas]
19 Hb_014508_020 0.1404173977 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g53440 isoform X1 [Jatropha curcas]
20 Hb_006846_050 0.1421182597 - - Rhicadhesin receptor precursor, putative [Ricinus communis]

Gene co-expression network

sample Hb_005015_090 Hb_005015_090 Hb_000115_210 Hb_000115_210 Hb_005015_090--Hb_000115_210 Hb_000431_040 Hb_000431_040 Hb_005015_090--Hb_000431_040 Hb_000431_050 Hb_000431_050 Hb_005015_090--Hb_000431_050 Hb_002757_020 Hb_002757_020 Hb_005015_090--Hb_002757_020 Hb_000352_210 Hb_000352_210 Hb_005015_090--Hb_000352_210 Hb_000331_380 Hb_000331_380 Hb_005015_090--Hb_000331_380 Hb_004162_150 Hb_004162_150 Hb_000115_210--Hb_004162_150 Hb_000307_160 Hb_000307_160 Hb_000115_210--Hb_000307_160 Hb_015183_090 Hb_015183_090 Hb_000115_210--Hb_015183_090 Hb_000115_210--Hb_000331_380 Hb_000115_210--Hb_000431_050 Hb_000375_210 Hb_000375_210 Hb_000431_040--Hb_000375_210 Hb_000431_040--Hb_002757_020 Hb_000389_120 Hb_000389_120 Hb_000431_040--Hb_000389_120 Hb_002601_030 Hb_002601_030 Hb_000431_040--Hb_002601_030 Hb_130357_010 Hb_130357_010 Hb_000431_040--Hb_130357_010 Hb_003729_040 Hb_003729_040 Hb_000431_040--Hb_003729_040 Hb_085158_010 Hb_085158_010 Hb_000431_050--Hb_085158_010 Hb_151436_010 Hb_151436_010 Hb_000431_050--Hb_151436_010 Hb_000431_050--Hb_000331_380 Hb_006970_180 Hb_006970_180 Hb_000431_050--Hb_006970_180 Hb_002073_210 Hb_002073_210 Hb_000431_050--Hb_002073_210 Hb_000431_050--Hb_000352_210 Hb_002757_020--Hb_000375_210 Hb_002028_250 Hb_002028_250 Hb_002757_020--Hb_002028_250 Hb_002757_020--Hb_000389_120 Hb_014508_020 Hb_014508_020 Hb_002757_020--Hb_014508_020 Hb_005914_190 Hb_005914_190 Hb_002757_020--Hb_005914_190 Hb_000352_210--Hb_000331_380 Hb_000392_080 Hb_000392_080 Hb_000352_210--Hb_000392_080 Hb_004396_020 Hb_004396_020 Hb_000352_210--Hb_004396_020 Hb_000352_210--Hb_002073_210 Hb_003152_010 Hb_003152_010 Hb_000352_210--Hb_003152_010 Hb_000331_380--Hb_002073_210 Hb_000331_380--Hb_004396_020 Hb_000331_380--Hb_000392_080 Hb_007007_140 Hb_007007_140 Hb_000331_380--Hb_007007_140
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.115117 1.86276 0.0126368 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0287165 0 0 0 0.0474041

CAGE analysis