Hb_000431_040

Information

Type -
Description -
Location Contig431: 90714-91434
Sequence    

Annotation

kegg
ID -
description -
nr
ID XP_012074018.1
description PREDICTED: uncharacterized protein LOC105635551 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_42215: 91193-91937
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000431_040 0.0 - - PREDICTED: uncharacterized protein LOC105635551 [Jatropha curcas]
2 Hb_000375_210 0.058070567 - - -
3 Hb_002757_020 0.0632428912 - - -
4 Hb_000389_120 0.063671053 - - hypothetical protein JCGZ_20066 [Jatropha curcas]
5 Hb_002601_030 0.0756701875 - - PREDICTED: uncharacterized protein LOC105634908 [Jatropha curcas]
6 Hb_130357_010 0.0776899857 - - PREDICTED: putative receptor-like protein kinase At3g47110 [Jatropha curcas]
7 Hb_003729_040 0.0777559435 - - o-methyltransferase, putative [Ricinus communis]
8 Hb_069237_010 0.0782244798 - - -
9 Hb_001347_020 0.0785251864 - - PREDICTED: cytochrome P450 86B1-like [Populus euphratica]
10 Hb_000422_100 0.0787201748 - - PREDICTED: TMV resistance protein N-like [Populus euphratica]
11 Hb_111442_010 0.0792269796 desease resistance Gene Name: AAA_16 LRR and NB-ARC domains-containing disease resistance protein, putative [Theobroma cacao]
12 Hb_000628_090 0.0804812219 - - hypothetical protein B456_010G019400 [Gossypium raimondii]
13 Hb_000258_010 0.0805920925 - - lipid transfer precursor protein [Hevea brasiliensis]
14 Hb_054865_110 0.0808191261 - - conserved hypothetical protein [Ricinus communis]
15 Hb_000194_040 0.080948831 - - carbonic anhydrase, putative [Ricinus communis]
16 Hb_005976_030 0.0820739511 - - PREDICTED: uncharacterized protein LOC105639715 [Jatropha curcas]
17 Hb_001892_040 0.0870410304 transcription factor TF Family: HB Protein WUSCHEL, putative [Ricinus communis]
18 Hb_118730_050 0.0888131034 - - RING/U-box superfamily protein isoform 4 [Theobroma cacao]
19 Hb_002783_290 0.0888757961 - - Uncharacterized protein TCM_034216 [Theobroma cacao]
20 Hb_001591_020 0.0894589959 transcription factor TF Family: bHLH basic helix-loop-helix family protein [Populus trichocarpa]

Gene co-expression network

sample Hb_000431_040 Hb_000431_040 Hb_000375_210 Hb_000375_210 Hb_000431_040--Hb_000375_210 Hb_002757_020 Hb_002757_020 Hb_000431_040--Hb_002757_020 Hb_000389_120 Hb_000389_120 Hb_000431_040--Hb_000389_120 Hb_002601_030 Hb_002601_030 Hb_000431_040--Hb_002601_030 Hb_130357_010 Hb_130357_010 Hb_000431_040--Hb_130357_010 Hb_003729_040 Hb_003729_040 Hb_000431_040--Hb_003729_040 Hb_002028_250 Hb_002028_250 Hb_000375_210--Hb_002028_250 Hb_000375_210--Hb_002757_020 Hb_000375_210--Hb_000389_120 Hb_014508_020 Hb_014508_020 Hb_000375_210--Hb_014508_020 Hb_000375_210--Hb_002601_030 Hb_002757_020--Hb_002028_250 Hb_002757_020--Hb_000389_120 Hb_002757_020--Hb_014508_020 Hb_005914_190 Hb_005914_190 Hb_002757_020--Hb_005914_190 Hb_000389_120--Hb_002601_030 Hb_118730_050 Hb_118730_050 Hb_000389_120--Hb_118730_050 Hb_002783_290 Hb_002783_290 Hb_000389_120--Hb_002783_290 Hb_000194_040 Hb_000194_040 Hb_000389_120--Hb_000194_040 Hb_054865_110 Hb_054865_110 Hb_000389_120--Hb_054865_110 Hb_178734_010 Hb_178734_010 Hb_000389_120--Hb_178734_010 Hb_002601_030--Hb_000194_040 Hb_002601_030--Hb_054865_110 Hb_000628_090 Hb_000628_090 Hb_002601_030--Hb_000628_090 Hb_111442_010 Hb_111442_010 Hb_002601_030--Hb_111442_010 Hb_002601_030--Hb_118730_050 Hb_130357_010--Hb_003729_040 Hb_069237_010 Hb_069237_010 Hb_130357_010--Hb_069237_010 Hb_001347_020 Hb_001347_020 Hb_130357_010--Hb_001347_020 Hb_000422_100 Hb_000422_100 Hb_130357_010--Hb_000422_100 Hb_130357_010--Hb_111442_010 Hb_130357_010--Hb_000628_090 Hb_003729_040--Hb_069237_010 Hb_003729_040--Hb_001347_020 Hb_003729_040--Hb_000422_100 Hb_000258_010 Hb_000258_010 Hb_003729_040--Hb_000258_010 Hb_003729_040--Hb_111442_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 3.06542 67.726 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.861083

CAGE analysis