Hb_000375_210

Information

Type -
Description -
Location Contig375: 237571-237761
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID Q6XQ14
description 2-methylbutanal oxime monooxygenase OS=Manihot esculenta GN=CYP71E7 PE=1 SV=1
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_38257: 237548-241840
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000375_210 0.0 - - -
2 Hb_002028_250 0.0436396206 - - Alpha-aminoadipic semialdehyde synthase, mitochondrial [Crassostrea gigas]
3 Hb_002757_020 0.048708296 - - -
4 Hb_000389_120 0.0535898371 - - hypothetical protein JCGZ_20066 [Jatropha curcas]
5 Hb_000431_040 0.058070567 - - PREDICTED: uncharacterized protein LOC105635551 [Jatropha curcas]
6 Hb_014508_020 0.0634223074 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g53440 isoform X1 [Jatropha curcas]
7 Hb_002601_030 0.0674718997 - - PREDICTED: uncharacterized protein LOC105634908 [Jatropha curcas]
8 Hb_118730_050 0.0736891245 - - RING/U-box superfamily protein isoform 4 [Theobroma cacao]
9 Hb_002783_290 0.0736999584 - - Uncharacterized protein TCM_034216 [Theobroma cacao]
10 Hb_000905_130 0.0739253137 - - PREDICTED: DNA-damage-repair/toleration protein DRT100 [Jatropha curcas]
11 Hb_178734_010 0.0740094288 - - PREDICTED: uncharacterized protein LOC103331175 [Prunus mume]
12 Hb_049573_010 0.0746084579 - - conserved hypothetical protein [Ricinus communis]
13 Hb_000194_040 0.0748154003 - - carbonic anhydrase, putative [Ricinus communis]
14 Hb_054865_110 0.0749059265 - - conserved hypothetical protein [Ricinus communis]
15 Hb_000628_090 0.0751643236 - - hypothetical protein B456_010G019400 [Gossypium raimondii]
16 Hb_003874_030 0.075674192 - - hypothetical protein JCGZ_00004 [Jatropha curcas]
17 Hb_111442_010 0.0765193795 desease resistance Gene Name: AAA_16 LRR and NB-ARC domains-containing disease resistance protein, putative [Theobroma cacao]
18 Hb_000422_100 0.0773620345 - - PREDICTED: TMV resistance protein N-like [Populus euphratica]
19 Hb_005914_190 0.0777108079 - - PREDICTED: acid phosphatase 1-like [Populus euphratica]
20 Hb_001347_020 0.077769731 - - PREDICTED: cytochrome P450 86B1-like [Populus euphratica]

Gene co-expression network

sample Hb_000375_210 Hb_000375_210 Hb_002028_250 Hb_002028_250 Hb_000375_210--Hb_002028_250 Hb_002757_020 Hb_002757_020 Hb_000375_210--Hb_002757_020 Hb_000389_120 Hb_000389_120 Hb_000375_210--Hb_000389_120 Hb_000431_040 Hb_000431_040 Hb_000375_210--Hb_000431_040 Hb_014508_020 Hb_014508_020 Hb_000375_210--Hb_014508_020 Hb_002601_030 Hb_002601_030 Hb_000375_210--Hb_002601_030 Hb_002028_250--Hb_014508_020 Hb_002028_250--Hb_002757_020 Hb_002028_250--Hb_000389_120 Hb_002289_160 Hb_002289_160 Hb_002028_250--Hb_002289_160 Hb_027136_030 Hb_027136_030 Hb_002028_250--Hb_027136_030 Hb_002757_020--Hb_000389_120 Hb_002757_020--Hb_014508_020 Hb_002757_020--Hb_000431_040 Hb_005914_190 Hb_005914_190 Hb_002757_020--Hb_005914_190 Hb_000389_120--Hb_002601_030 Hb_118730_050 Hb_118730_050 Hb_000389_120--Hb_118730_050 Hb_002783_290 Hb_002783_290 Hb_000389_120--Hb_002783_290 Hb_000194_040 Hb_000194_040 Hb_000389_120--Hb_000194_040 Hb_054865_110 Hb_054865_110 Hb_000389_120--Hb_054865_110 Hb_178734_010 Hb_178734_010 Hb_000389_120--Hb_178734_010 Hb_000431_040--Hb_000389_120 Hb_000431_040--Hb_002601_030 Hb_130357_010 Hb_130357_010 Hb_000431_040--Hb_130357_010 Hb_003729_040 Hb_003729_040 Hb_000431_040--Hb_003729_040 Hb_014508_020--Hb_000389_120 Hb_099538_020 Hb_099538_020 Hb_014508_020--Hb_099538_020 Hb_010261_070 Hb_010261_070 Hb_014508_020--Hb_010261_070 Hb_014508_020--Hb_005914_190 Hb_014508_020--Hb_002289_160 Hb_002601_030--Hb_000194_040 Hb_002601_030--Hb_054865_110 Hb_000628_090 Hb_000628_090 Hb_002601_030--Hb_000628_090 Hb_111442_010 Hb_111442_010 Hb_002601_030--Hb_111442_010 Hb_002601_030--Hb_118730_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 34.7903 518.815 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 1.82147 4.1913

CAGE analysis