Hb_000367_110

Information

Type -
Description -
Location Contig367: 106609-108412
Sequence    

Annotation

kegg
ID pmum:103337588
description monodehydroascorbate reductase, chloroplastic
nr
ID XP_011073229.1
description PREDICTED: monodehydroascorbate reductase, chloroplastic isoform X1 [Sesamum indicum]
swissprot
ID P92947
description Monodehydroascorbate reductase, chloroplastic OS=Arabidopsis thaliana GN=At1g63940 PE=2 SV=3
trembl
ID M5WCZ6
description Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005003mg PE=4 SV=1
Gene Ontology
ID GO:0005739
description monodehydroascorbate chloroplastic isoform x2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000367_110 0.0 - - PREDICTED: monodehydroascorbate reductase, chloroplastic isoform X1 [Sesamum indicum]
2 Hb_002641_170 0.1528467361 - - zinc finger protein, putative [Ricinus communis]
3 Hb_000347_520 0.2010688771 transcription factor TF Family: AP2 hypothetical protein JCGZ_24704 [Jatropha curcas]
4 Hb_000188_080 0.2049729621 - - PREDICTED: uncharacterized protein LOC105629484 [Jatropha curcas]
5 Hb_004308_010 0.2123268578 - - hypothetical protein CISIN_1g0004672mg, partial [Citrus sinensis]
6 Hb_004218_100 0.2231615798 - - PREDICTED: DNA-directed RNA polymerase V subunit 5C [Jatropha curcas]
7 Hb_003988_020 0.2240471198 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH85-like [Populus euphratica]
8 Hb_000170_180 0.2279514953 - - PREDICTED: uncharacterized protein LOC105109433 [Populus euphratica]
9 Hb_003333_070 0.233822772 - - Ent-kaurenoic acid oxidase, putative [Ricinus communis]
10 Hb_003906_020 0.2375364237 - - PREDICTED: uncharacterized protein LOC105648535 [Jatropha curcas]
11 Hb_002309_030 0.2436654436 - - Glycerol dehydrogenase large subunit, putative [Theobroma cacao]
12 Hb_010866_020 0.2514006717 - - unnamed protein product [Vitis vinifera]
13 Hb_000042_350 0.2535215853 - - hypothetical protein JCGZ_00710 [Jatropha curcas]
14 Hb_002003_100 0.2546831956 - - -
15 Hb_001396_270 0.2555923189 - - 4-coumarate--CoA ligase family protein [Populus trichocarpa]
16 Hb_000614_310 0.2572111742 - - conserved hypothetical protein [Ricinus communis]
17 Hb_000345_060 0.2623002163 - - PREDICTED: REF/SRPP-like protein At3g05500 [Jatropha curcas]
18 Hb_000087_010 0.2647607479 - - mta/sah nucleosidase, putative [Ricinus communis]
19 Hb_006469_110 0.267732298 - - hypothetical protein JCGZ_12008 [Jatropha curcas]
20 Hb_000042_120 0.2710706423 - - PREDICTED: uncharacterized protein LOC105632800 [Jatropha curcas]

Gene co-expression network

sample Hb_000367_110 Hb_000367_110 Hb_002641_170 Hb_002641_170 Hb_000367_110--Hb_002641_170 Hb_000347_520 Hb_000347_520 Hb_000367_110--Hb_000347_520 Hb_000188_080 Hb_000188_080 Hb_000367_110--Hb_000188_080 Hb_004308_010 Hb_004308_010 Hb_000367_110--Hb_004308_010 Hb_004218_100 Hb_004218_100 Hb_000367_110--Hb_004218_100 Hb_003988_020 Hb_003988_020 Hb_000367_110--Hb_003988_020 Hb_003906_020 Hb_003906_020 Hb_002641_170--Hb_003906_020 Hb_002641_170--Hb_004218_100 Hb_010866_020 Hb_010866_020 Hb_002641_170--Hb_010866_020 Hb_002641_170--Hb_000347_520 Hb_006469_110 Hb_006469_110 Hb_002641_170--Hb_006469_110 Hb_000347_520--Hb_010866_020 Hb_000347_520--Hb_006469_110 Hb_003333_070 Hb_003333_070 Hb_000347_520--Hb_003333_070 Hb_000347_520--Hb_000188_080 Hb_002309_030 Hb_002309_030 Hb_000347_520--Hb_002309_030 Hb_000188_080--Hb_003333_070 Hb_008535_020 Hb_008535_020 Hb_000188_080--Hb_008535_020 Hb_000325_090 Hb_000325_090 Hb_000188_080--Hb_000325_090 Hb_001247_050 Hb_001247_050 Hb_000188_080--Hb_001247_050 Hb_000188_080--Hb_004308_010 Hb_000566_060 Hb_000566_060 Hb_000188_080--Hb_000566_060 Hb_004308_010--Hb_003333_070 Hb_000577_060 Hb_000577_060 Hb_004308_010--Hb_000577_060 Hb_000753_270 Hb_000753_270 Hb_004308_010--Hb_000753_270 Hb_004308_010--Hb_002309_030 Hb_004308_010--Hb_010866_020 Hb_001396_270 Hb_001396_270 Hb_004218_100--Hb_001396_270 Hb_005914_220 Hb_005914_220 Hb_004218_100--Hb_005914_220 Hb_004218_100--Hb_002309_030 Hb_006012_030 Hb_006012_030 Hb_004218_100--Hb_006012_030 Hb_000042_350 Hb_000042_350 Hb_003988_020--Hb_000042_350 Hb_002003_100 Hb_002003_100 Hb_003988_020--Hb_002003_100 Hb_003988_020--Hb_001396_270 Hb_000164_210 Hb_000164_210 Hb_003988_020--Hb_000164_210 Hb_034858_010 Hb_034858_010 Hb_003988_020--Hb_034858_010 Hb_000042_120 Hb_000042_120 Hb_003988_020--Hb_000042_120
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0935201 0 0.116641 1.40758 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.1705 0 0 0.056581 0

CAGE analysis