Hb_006469_110

Information

Type -
Description -
Location Contig6469: 136665-136931
Sequence    

Annotation

kegg
ID cit:102624581
description uncharacterized LOC102624581
nr
ID KDP32716.1
description hypothetical protein JCGZ_12008 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067K937
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12008 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006469_110 0.0 - - hypothetical protein JCGZ_12008 [Jatropha curcas]
2 Hb_002309_030 0.116975691 - - Glycerol dehydrogenase large subunit, putative [Theobroma cacao]
3 Hb_000347_520 0.1597466728 transcription factor TF Family: AP2 hypothetical protein JCGZ_24704 [Jatropha curcas]
4 Hb_122079_010 0.1645279741 - - PREDICTED: uncharacterized protein LOC105127729 [Populus euphratica]
5 Hb_061335_010 0.1670030115 - - hypothetical protein POPTR_0004s17300g [Populus trichocarpa]
6 Hb_000053_150 0.1687167803 - - clavata3/esr-related 12 family protein [Populus trichocarpa]
7 Hb_010812_080 0.1704544456 - - PREDICTED: methylesterase 17 [Jatropha curcas]
8 Hb_005057_020 0.1725921114 - - PREDICTED: uncharacterized protein LOC105631610 [Jatropha curcas]
9 Hb_178968_010 0.1755494238 - - hypothetical protein JCGZ_15830 [Jatropha curcas]
10 Hb_003333_070 0.1761813428 - - Ent-kaurenoic acid oxidase, putative [Ricinus communis]
11 Hb_004342_040 0.1770540465 - - PREDICTED: carotenoid 9,10(9',10')-cleavage dioxygenase 1-like [Jatropha curcas]
12 Hb_010866_020 0.1789333546 - - unnamed protein product [Vitis vinifera]
13 Hb_003216_010 0.1832463219 - - glycosyl hydrolase family protein [Populus trichocarpa]
14 Hb_000277_040 0.1846318807 - - -
15 Hb_002186_120 0.1889884624 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g53440 isoform X5 [Populus euphratica]
16 Hb_157881_010 0.1890884385 - - ubiquitin-protein ligase, putative [Ricinus communis]
17 Hb_018671_010 0.1890888611 - - -
18 Hb_012545_020 0.1903993298 - - PREDICTED: uncharacterized protein LOC105633903 [Jatropha curcas]
19 Hb_002534_140 0.191985254 - - hypothetical protein JCGZ_11629 [Jatropha curcas]
20 Hb_004137_090 0.1925521412 - - PREDICTED: tumor necrosis factor ligand superfamily member 6 [Populus euphratica]

Gene co-expression network

sample Hb_006469_110 Hb_006469_110 Hb_002309_030 Hb_002309_030 Hb_006469_110--Hb_002309_030 Hb_000347_520 Hb_000347_520 Hb_006469_110--Hb_000347_520 Hb_122079_010 Hb_122079_010 Hb_006469_110--Hb_122079_010 Hb_061335_010 Hb_061335_010 Hb_006469_110--Hb_061335_010 Hb_000053_150 Hb_000053_150 Hb_006469_110--Hb_000053_150 Hb_010812_080 Hb_010812_080 Hb_006469_110--Hb_010812_080 Hb_003333_070 Hb_003333_070 Hb_002309_030--Hb_003333_070 Hb_004308_010 Hb_004308_010 Hb_002309_030--Hb_004308_010 Hb_008535_020 Hb_008535_020 Hb_002309_030--Hb_008535_020 Hb_000188_080 Hb_000188_080 Hb_002309_030--Hb_000188_080 Hb_002186_120 Hb_002186_120 Hb_002309_030--Hb_002186_120 Hb_010866_020 Hb_010866_020 Hb_000347_520--Hb_010866_020 Hb_000347_520--Hb_003333_070 Hb_000347_520--Hb_000188_080 Hb_000367_110 Hb_000367_110 Hb_000347_520--Hb_000367_110 Hb_000347_520--Hb_002309_030 Hb_122079_010--Hb_000053_150 Hb_122079_010--Hb_010812_080 Hb_122079_010--Hb_061335_010 Hb_178968_010 Hb_178968_010 Hb_122079_010--Hb_178968_010 Hb_005057_020 Hb_005057_020 Hb_122079_010--Hb_005057_020 Hb_000277_040 Hb_000277_040 Hb_122079_010--Hb_000277_040 Hb_004342_040 Hb_004342_040 Hb_061335_010--Hb_004342_040 Hb_061335_010--Hb_005057_020 Hb_157881_010 Hb_157881_010 Hb_061335_010--Hb_157881_010 Hb_061335_010--Hb_000053_150 Hb_061335_010--Hb_010812_080 Hb_000053_150--Hb_178968_010 Hb_000053_150--Hb_005057_020 Hb_018671_010 Hb_018671_010 Hb_000053_150--Hb_018671_010 Hb_000053_150--Hb_002186_120 Hb_000053_150--Hb_010812_080 Hb_012545_020 Hb_012545_020 Hb_010812_080--Hb_012545_020 Hb_010812_080--Hb_000277_040 Hb_000099_110 Hb_000099_110 Hb_010812_080--Hb_000099_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.219656 1.56252 7.44828 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.5129 0 0 0 0

CAGE analysis