Hb_178968_010

Information

Type -
Description -
Location Contig178968: 2830-13628
Sequence    

Annotation

kegg
ID pmum:103329062
description wall-associated receptor kinase-like 9
nr
ID KDP41423.1
description hypothetical protein JCGZ_15830 [Jatropha curcas]
swissprot
ID Q9S9M5
description Wall-associated receptor kinase-like 1 OS=Arabidopsis thaliana GN=WAKL1 PE=2 SV=1
trembl
ID A0A067L2G3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15830 PE=4 SV=1
Gene Ontology
ID GO:0016021
description wall-associated receptor kinase-like 22

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_178968_010 0.0 - - hypothetical protein JCGZ_15830 [Jatropha curcas]
2 Hb_000053_150 0.0250980633 - - clavata3/esr-related 12 family protein [Populus trichocarpa]
3 Hb_003540_010 0.0450543036 - - -
4 Hb_018671_010 0.0475756476 - - -
5 Hb_003216_010 0.0476894264 - - glycosyl hydrolase family protein [Populus trichocarpa]
6 Hb_122079_010 0.0500453217 - - PREDICTED: uncharacterized protein LOC105127729 [Populus euphratica]
7 Hb_002186_120 0.0509094037 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g53440 isoform X5 [Populus euphratica]
8 Hb_005057_020 0.0540554014 - - PREDICTED: uncharacterized protein LOC105631610 [Jatropha curcas]
9 Hb_004137_090 0.0646944531 - - PREDICTED: tumor necrosis factor ligand superfamily member 6 [Populus euphratica]
10 Hb_000277_040 0.0678046631 - - -
11 Hb_000917_220 0.0697522739 - - clavata3/esr-related 12 family protein [Populus trichocarpa]
12 Hb_000224_050 0.0753069585 - - conserved hypothetical protein [Ricinus communis]
13 Hb_010812_080 0.0833365968 - - PREDICTED: methylesterase 17 [Jatropha curcas]
14 Hb_000696_120 0.0873312324 - - PREDICTED: protein FD [Populus euphratica]
15 Hb_174829_030 0.0879281569 - - conserved hypothetical protein [Ricinus communis]
16 Hb_003561_020 0.0888037298 - - gulonolactone oxidase, putative [Ricinus communis]
17 Hb_061335_010 0.0910258127 - - hypothetical protein POPTR_0004s17300g [Populus trichocarpa]
18 Hb_007290_010 0.0916389486 - - cytochrome P450, putative [Ricinus communis]
19 Hb_004342_040 0.0919259901 - - PREDICTED: carotenoid 9,10(9',10')-cleavage dioxygenase 1-like [Jatropha curcas]
20 Hb_010080_040 0.0982876734 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_178968_010 Hb_178968_010 Hb_000053_150 Hb_000053_150 Hb_178968_010--Hb_000053_150 Hb_003540_010 Hb_003540_010 Hb_178968_010--Hb_003540_010 Hb_018671_010 Hb_018671_010 Hb_178968_010--Hb_018671_010 Hb_003216_010 Hb_003216_010 Hb_178968_010--Hb_003216_010 Hb_122079_010 Hb_122079_010 Hb_178968_010--Hb_122079_010 Hb_002186_120 Hb_002186_120 Hb_178968_010--Hb_002186_120 Hb_000053_150--Hb_122079_010 Hb_005057_020 Hb_005057_020 Hb_000053_150--Hb_005057_020 Hb_000053_150--Hb_018671_010 Hb_000053_150--Hb_002186_120 Hb_010812_080 Hb_010812_080 Hb_000053_150--Hb_010812_080 Hb_000917_220 Hb_000917_220 Hb_003540_010--Hb_000917_220 Hb_003540_010--Hb_003216_010 Hb_174829_030 Hb_174829_030 Hb_003540_010--Hb_174829_030 Hb_004137_090 Hb_004137_090 Hb_003540_010--Hb_004137_090 Hb_003540_010--Hb_000053_150 Hb_018671_010--Hb_002186_120 Hb_000277_040 Hb_000277_040 Hb_018671_010--Hb_000277_040 Hb_018671_010--Hb_003540_010 Hb_000224_050 Hb_000224_050 Hb_018671_010--Hb_000224_050 Hb_003216_010--Hb_005057_020 Hb_000696_120 Hb_000696_120 Hb_003216_010--Hb_000696_120 Hb_003216_010--Hb_174829_030 Hb_003216_010--Hb_000917_220 Hb_122079_010--Hb_010812_080 Hb_061335_010 Hb_061335_010 Hb_122079_010--Hb_061335_010 Hb_122079_010--Hb_005057_020 Hb_122079_010--Hb_000277_040 Hb_002186_120--Hb_000277_040 Hb_002186_120--Hb_000224_050 Hb_002186_120--Hb_003540_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.00591134 0.0179341 0.116833 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis