Hb_018671_010

Information

Type -
Description -
Location Contig18671: 10493-12112
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_018671_010 0.0 - - -
2 Hb_002186_120 0.0057706585 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g53440 isoform X5 [Populus euphratica]
3 Hb_000277_040 0.0405341016 - - -
4 Hb_178968_010 0.0475756476 - - hypothetical protein JCGZ_15830 [Jatropha curcas]
5 Hb_000053_150 0.0573954054 - - clavata3/esr-related 12 family protein [Populus trichocarpa]
6 Hb_003540_010 0.0694947709 - - -
7 Hb_000224_050 0.0711528938 - - conserved hypothetical protein [Ricinus communis]
8 Hb_004137_090 0.0784768179 - - PREDICTED: tumor necrosis factor ligand superfamily member 6 [Populus euphratica]
9 Hb_122079_010 0.080258597 - - PREDICTED: uncharacterized protein LOC105127729 [Populus euphratica]
10 Hb_000917_220 0.0824601426 - - clavata3/esr-related 12 family protein [Populus trichocarpa]
11 Hb_000099_110 0.0856175952 - - PREDICTED: disease resistance response protein 206-like [Jatropha curcas]
12 Hb_012545_020 0.0867618723 - - PREDICTED: uncharacterized protein LOC105633903 [Jatropha curcas]
13 Hb_000203_120 0.0896790853 - - conserved hypothetical protein [Ricinus communis]
14 Hb_003216_010 0.0909075173 - - glycosyl hydrolase family protein [Populus trichocarpa]
15 Hb_010812_080 0.0914962335 - - PREDICTED: methylesterase 17 [Jatropha curcas]
16 Hb_008727_090 0.0952654898 - - PREDICTED: 17.3 kDa class I heat shock protein-like [Jatropha curcas]
17 Hb_000381_140 0.0965890229 - - PREDICTED: S-type anion channel SLAH4-like [Jatropha curcas]
18 Hb_007290_010 0.0995321582 - - cytochrome P450, putative [Ricinus communis]
19 Hb_005057_020 0.1011804306 - - PREDICTED: uncharacterized protein LOC105631610 [Jatropha curcas]
20 Hb_181191_010 0.1078612313 - - kinase, putative [Ricinus communis]

Gene co-expression network

sample Hb_018671_010 Hb_018671_010 Hb_002186_120 Hb_002186_120 Hb_018671_010--Hb_002186_120 Hb_000277_040 Hb_000277_040 Hb_018671_010--Hb_000277_040 Hb_178968_010 Hb_178968_010 Hb_018671_010--Hb_178968_010 Hb_000053_150 Hb_000053_150 Hb_018671_010--Hb_000053_150 Hb_003540_010 Hb_003540_010 Hb_018671_010--Hb_003540_010 Hb_000224_050 Hb_000224_050 Hb_018671_010--Hb_000224_050 Hb_002186_120--Hb_000277_040 Hb_002186_120--Hb_178968_010 Hb_002186_120--Hb_000053_150 Hb_002186_120--Hb_000224_050 Hb_002186_120--Hb_003540_010 Hb_012545_020 Hb_012545_020 Hb_000277_040--Hb_012545_020 Hb_000099_110 Hb_000099_110 Hb_000277_040--Hb_000099_110 Hb_000277_040--Hb_000053_150 Hb_010812_080 Hb_010812_080 Hb_000277_040--Hb_010812_080 Hb_178968_010--Hb_000053_150 Hb_178968_010--Hb_003540_010 Hb_003216_010 Hb_003216_010 Hb_178968_010--Hb_003216_010 Hb_122079_010 Hb_122079_010 Hb_178968_010--Hb_122079_010 Hb_000053_150--Hb_122079_010 Hb_005057_020 Hb_005057_020 Hb_000053_150--Hb_005057_020 Hb_000053_150--Hb_010812_080 Hb_000917_220 Hb_000917_220 Hb_003540_010--Hb_000917_220 Hb_003540_010--Hb_003216_010 Hb_174829_030 Hb_174829_030 Hb_003540_010--Hb_174829_030 Hb_004137_090 Hb_004137_090 Hb_003540_010--Hb_004137_090 Hb_003540_010--Hb_000053_150 Hb_000224_050--Hb_178968_010 Hb_000224_050--Hb_003540_010 Hb_000224_020 Hb_000224_020 Hb_000224_050--Hb_000224_020 Hb_000224_050--Hb_000917_220
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.012315 0.0338205 0.308693 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis