Hb_012545_020

Information

Type -
Description -
Location Contig12545: 15181-15432
Sequence    

Annotation

kegg
ID rcu:RCOM_1591730
description hypothetical protein
nr
ID XP_012071997.1
description PREDICTED: uncharacterized protein LOC105633903 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KTT5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04313 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_012545_020 0.0 - - PREDICTED: uncharacterized protein LOC105633903 [Jatropha curcas]
2 Hb_000099_110 0.0250468053 - - PREDICTED: disease resistance response protein 206-like [Jatropha curcas]
3 Hb_000277_040 0.0476493738 - - -
4 Hb_010812_080 0.0547015262 - - PREDICTED: methylesterase 17 [Jatropha curcas]
5 Hb_006198_160 0.0595085803 - - hypothetical protein POPTR_0002s24290g [Populus trichocarpa]
6 Hb_015447_010 0.0595300682 - - PREDICTED: uncharacterized protein LOC105111046 [Populus euphratica]
7 Hb_101724_010 0.0597864144 - - glutamate receptor family protein [Populus trichocarpa]
8 Hb_093541_010 0.0598962775 - - conserved hypothetical protein [Ricinus communis]
9 Hb_003849_210 0.0600341317 transcription factor TF Family: ERF hypothetical protein RCOM_0793640 [Ricinus communis]
10 Hb_000087_110 0.0601511956 - - conserved hypothetical protein [Ricinus communis]
11 Hb_010128_140 0.0604228863 - - hypothetical protein JCGZ_23164 [Jatropha curcas]
12 Hb_001552_010 0.0611194376 - - conserved hypothetical protein [Ricinus communis]
13 Hb_005356_020 0.0612896568 - - glutaredoxin, grx, putative [Ricinus communis]
14 Hb_005081_050 0.0615160173 transcription factor TF Family: MYB-related PREDICTED: transcription factor WER-like [Prunus mume]
15 Hb_073680_010 0.0620107604 - - Coiled-coil domain-containing protein, putative [Ricinus communis]
16 Hb_157950_010 0.0620425513 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO2 isoform X1 [Jatropha curcas]
17 Hb_003687_060 0.0622794146 - - conserved hypothetical protein [Ricinus communis]
18 Hb_003424_040 0.0624203662 - - PREDICTED: putative disease resistance protein RGA1 [Eucalyptus grandis]
19 Hb_003038_020 0.0624971344 - - unnamed protein product [Coffea canephora]
20 Hb_005333_090 0.0627325453 - - PREDICTED: mitochondrial uncoupling protein 5 [Jatropha curcas]

Gene co-expression network

sample Hb_012545_020 Hb_012545_020 Hb_000099_110 Hb_000099_110 Hb_012545_020--Hb_000099_110 Hb_000277_040 Hb_000277_040 Hb_012545_020--Hb_000277_040 Hb_010812_080 Hb_010812_080 Hb_012545_020--Hb_010812_080 Hb_006198_160 Hb_006198_160 Hb_012545_020--Hb_006198_160 Hb_015447_010 Hb_015447_010 Hb_012545_020--Hb_015447_010 Hb_101724_010 Hb_101724_010 Hb_012545_020--Hb_101724_010 Hb_000099_110--Hb_000277_040 Hb_000099_110--Hb_010812_080 Hb_000087_110 Hb_000087_110 Hb_000099_110--Hb_000087_110 Hb_093541_010 Hb_093541_010 Hb_000099_110--Hb_093541_010 Hb_000099_110--Hb_101724_010 Hb_002186_120 Hb_002186_120 Hb_000277_040--Hb_002186_120 Hb_018671_010 Hb_018671_010 Hb_000277_040--Hb_018671_010 Hb_000053_150 Hb_000053_150 Hb_000277_040--Hb_000053_150 Hb_000277_040--Hb_010812_080 Hb_122079_010 Hb_122079_010 Hb_010812_080--Hb_122079_010 Hb_010812_080--Hb_000053_150 Hb_061335_010 Hb_061335_010 Hb_010812_080--Hb_061335_010 Hb_006198_160--Hb_015447_010 Hb_006198_160--Hb_101724_010 Hb_006198_160--Hb_093541_010 Hb_006198_160--Hb_000087_110 Hb_003849_210 Hb_003849_210 Hb_006198_160--Hb_003849_210 Hb_010128_140 Hb_010128_140 Hb_006198_160--Hb_010128_140 Hb_015447_010--Hb_003849_210 Hb_015447_010--Hb_101724_010 Hb_015447_010--Hb_093541_010 Hb_015447_010--Hb_010128_140 Hb_015447_010--Hb_000087_110 Hb_101724_010--Hb_093541_010 Hb_101724_010--Hb_000087_110 Hb_005081_050 Hb_005081_050 Hb_101724_010--Hb_005081_050 Hb_073680_010 Hb_073680_010 Hb_101724_010--Hb_073680_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.05264 16.1115 131.852 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis