Hb_010128_140

Information

Type -
Description -
Location Contig10128: 88805-89029
Sequence    

Annotation

kegg
ID rcu:RCOM_1436800
description hypothetical protein
nr
ID KDP23331.1
description hypothetical protein JCGZ_23164 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JHC3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23164 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010128_140 0.0 - - hypothetical protein JCGZ_23164 [Jatropha curcas]
2 Hb_003849_210 0.0025460028 transcription factor TF Family: ERF hypothetical protein RCOM_0793640 [Ricinus communis]
3 Hb_001552_010 0.003471829 - - conserved hypothetical protein [Ricinus communis]
4 Hb_005356_020 0.0042012054 - - glutaredoxin, grx, putative [Ricinus communis]
5 Hb_003687_060 0.0079091822 - - conserved hypothetical protein [Ricinus communis]
6 Hb_003038_020 0.0086356168 - - unnamed protein product [Coffea canephora]
7 Hb_015447_010 0.0088178376 - - PREDICTED: uncharacterized protein LOC105111046 [Populus euphratica]
8 Hb_005333_090 0.0093939727 - - PREDICTED: mitochondrial uncoupling protein 5 [Jatropha curcas]
9 Hb_006198_160 0.0110279238 - - hypothetical protein POPTR_0002s24290g [Populus trichocarpa]
10 Hb_004899_240 0.0126890499 - - conserved hypothetical protein [Ricinus communis]
11 Hb_002157_110 0.0157582624 transcription factor TF Family: bHLH Transcription factor ICE1, putative [Ricinus communis]
12 Hb_101724_010 0.0162931504 - - glutamate receptor family protein [Populus trichocarpa]
13 Hb_093541_010 0.0173377603 - - conserved hypothetical protein [Ricinus communis]
14 Hb_000087_110 0.0193010089 - - conserved hypothetical protein [Ricinus communis]
15 Hb_036116_010 0.0211223968 - - JHL22C18.10 [Jatropha curcas]
16 Hb_090521_010 0.0228321912 - - Major allergen Pru ar, putative [Ricinus communis]
17 Hb_000471_130 0.0253089792 - - conserved hypothetical protein [Ricinus communis]
18 Hb_005081_050 0.0261201303 transcription factor TF Family: MYB-related PREDICTED: transcription factor WER-like [Prunus mume]
19 Hb_002217_010 0.026202577 - - Peroxiredoxin, putative [Ricinus communis]
20 Hb_073680_010 0.0279716816 - - Coiled-coil domain-containing protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_010128_140 Hb_010128_140 Hb_003849_210 Hb_003849_210 Hb_010128_140--Hb_003849_210 Hb_001552_010 Hb_001552_010 Hb_010128_140--Hb_001552_010 Hb_005356_020 Hb_005356_020 Hb_010128_140--Hb_005356_020 Hb_003687_060 Hb_003687_060 Hb_010128_140--Hb_003687_060 Hb_003038_020 Hb_003038_020 Hb_010128_140--Hb_003038_020 Hb_015447_010 Hb_015447_010 Hb_010128_140--Hb_015447_010 Hb_003849_210--Hb_001552_010 Hb_003849_210--Hb_015447_010 Hb_003849_210--Hb_005356_020 Hb_006198_160 Hb_006198_160 Hb_003849_210--Hb_006198_160 Hb_003849_210--Hb_003687_060 Hb_001552_010--Hb_005356_020 Hb_001552_010--Hb_003687_060 Hb_001552_010--Hb_003038_020 Hb_005333_090 Hb_005333_090 Hb_001552_010--Hb_005333_090 Hb_005356_020--Hb_003687_060 Hb_005356_020--Hb_003038_020 Hb_005356_020--Hb_005333_090 Hb_003687_060--Hb_003038_020 Hb_003687_060--Hb_005333_090 Hb_004899_240 Hb_004899_240 Hb_003687_060--Hb_004899_240 Hb_002157_110 Hb_002157_110 Hb_003687_060--Hb_002157_110 Hb_003038_020--Hb_005333_090 Hb_003038_020--Hb_004899_240 Hb_003038_020--Hb_002157_110 Hb_015447_010--Hb_006198_160 Hb_101724_010 Hb_101724_010 Hb_015447_010--Hb_101724_010 Hb_093541_010 Hb_093541_010 Hb_015447_010--Hb_093541_010 Hb_000087_110 Hb_000087_110 Hb_015447_010--Hb_000087_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.545908 4.13148 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis