Hb_000042_350

Information

Type -
Description -
Location Contig42: 298160-298396
Sequence    

Annotation

kegg
ID pop:POPTR_0011s12730g
description hypothetical protein
nr
ID KDP38953.1
description hypothetical protein JCGZ_00710 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KVD4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00710 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000042_350 0.0 - - hypothetical protein JCGZ_00710 [Jatropha curcas]
2 Hb_003988_020 0.1186391694 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH85-like [Populus euphratica]
3 Hb_002003_100 0.1591399666 - - -
4 Hb_004330_060 0.1849311813 - - hypothetical protein POPTR_0011s01530g [Populus trichocarpa]
5 Hb_001396_270 0.1906678504 - - 4-coumarate--CoA ligase family protein [Populus trichocarpa]
6 Hb_039946_040 0.1971247145 - - PREDICTED: sugar transport protein 14-like [Jatropha curcas]
7 Hb_000164_210 0.2002831408 - - glutaredoxin-1, grx1, putative [Ricinus communis]
8 Hb_000220_020 0.205112332 - - hypothetical protein CICLE_v10017575mg [Citrus clementina]
9 Hb_002374_540 0.2068704748 - - RecName: Full=Esterase; AltName: Full=Early nodule-specific protein homolog; AltName: Full=Latex allergen Hev b 13; AltName: Allergen=Hev b 13; Flags: Precursor [Hevea brasiliensis]
10 Hb_000392_060 0.207606918 - - hypothetical protein JCGZ_11629 [Jatropha curcas]
11 Hb_001091_040 0.2094301491 - - hypothetical protein JCGZ_01204 [Jatropha curcas]
12 Hb_034858_010 0.2162517182 - - -
13 Hb_000139_460 0.2165301897 - - basic 7S globulin 2 precursor small subunit, putative [Ricinus communis]
14 Hb_001269_100 0.2175000988 - - plasma membrane ATPase 1, partial [Triticum aestivum]
15 Hb_000071_040 0.2182975597 - - hypothetical protein POPTR_0001s24580g [Populus trichocarpa]
16 Hb_000740_140 0.2184246187 transcription factor TF Family: OFP PREDICTED: probable transcription repressor OFP9 [Jatropha curcas]
17 Hb_004031_060 0.2192527842 - - hypothetical protein B456_007G3219002, partial [Gossypium raimondii]
18 Hb_000622_140 0.2195806433 - - conserved hypothetical protein [Ricinus communis]
19 Hb_001741_110 0.2198182527 rubber biosynthesis Gene Name: REF7 REF/SRPP-like protein [Glycine soja]
20 Hb_004926_010 0.220315483 - - hypothetical protein JCGZ_27059 [Jatropha curcas]

Gene co-expression network

sample Hb_000042_350 Hb_000042_350 Hb_003988_020 Hb_003988_020 Hb_000042_350--Hb_003988_020 Hb_002003_100 Hb_002003_100 Hb_000042_350--Hb_002003_100 Hb_004330_060 Hb_004330_060 Hb_000042_350--Hb_004330_060 Hb_001396_270 Hb_001396_270 Hb_000042_350--Hb_001396_270 Hb_039946_040 Hb_039946_040 Hb_000042_350--Hb_039946_040 Hb_000164_210 Hb_000164_210 Hb_000042_350--Hb_000164_210 Hb_003988_020--Hb_002003_100 Hb_003988_020--Hb_001396_270 Hb_003988_020--Hb_000164_210 Hb_034858_010 Hb_034858_010 Hb_003988_020--Hb_034858_010 Hb_000042_120 Hb_000042_120 Hb_003988_020--Hb_000042_120 Hb_002003_100--Hb_004330_060 Hb_000935_060 Hb_000935_060 Hb_002003_100--Hb_000935_060 Hb_004102_150 Hb_004102_150 Hb_002003_100--Hb_004102_150 Hb_000926_240 Hb_000926_240 Hb_002003_100--Hb_000926_240 Hb_059226_020 Hb_059226_020 Hb_004330_060--Hb_059226_020 Hb_004330_060--Hb_039946_040 Hb_159012_010 Hb_159012_010 Hb_004330_060--Hb_159012_010 Hb_000480_050 Hb_000480_050 Hb_004330_060--Hb_000480_050 Hb_082733_010 Hb_082733_010 Hb_004330_060--Hb_082733_010 Hb_006012_030 Hb_006012_030 Hb_001396_270--Hb_006012_030 Hb_005914_220 Hb_005914_220 Hb_001396_270--Hb_005914_220 Hb_001396_270--Hb_000042_120 Hb_002374_540 Hb_002374_540 Hb_001396_270--Hb_002374_540 Hb_000270_590 Hb_000270_590 Hb_001396_270--Hb_000270_590 Hb_006351_040 Hb_006351_040 Hb_039946_040--Hb_006351_040 Hb_039946_040--Hb_059226_020 Hb_001091_040 Hb_001091_040 Hb_039946_040--Hb_001091_040 Hb_004319_100 Hb_004319_100 Hb_039946_040--Hb_004319_100 Hb_004926_010 Hb_004926_010 Hb_039946_040--Hb_004926_010 Hb_000194_030 Hb_000194_030 Hb_039946_040--Hb_000194_030 Hb_000579_160 Hb_000579_160 Hb_000164_210--Hb_000579_160 Hb_109187_010 Hb_109187_010 Hb_000164_210--Hb_109187_010 Hb_041188_010 Hb_041188_010 Hb_000164_210--Hb_041188_010 Hb_025526_110 Hb_025526_110 Hb_000164_210--Hb_025526_110 Hb_000589_080 Hb_000589_080 Hb_000164_210--Hb_000589_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.14411 0.384685 3.34235 52.4673 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.594679 0 3.91614 0.774763

CAGE analysis