Hb_002374_540

Information

Type -
Description -
Location Contig2374: 455598-457507
Sequence    

Annotation

kegg
ID egr:104417005
description uncharacterized LOC104417005
nr
ID Q7Y1X1.1
description RecName: Full=Esterase; AltName: Full=Early nodule-specific protein homolog; AltName: Full=Latex allergen Hev b 13; AltName: Allergen=Hev b 13; Flags: Precursor [Hevea brasiliensis]
swissprot
ID Q7Y1X1
description Esterase OS=Hevea brasiliensis PE=1 SV=1
trembl
ID A0A0D2RHX8
description Gossypium raimondii chromosome 5, whole genome shotgun sequence OS=Gossypium raimondii GN=B456_005G089700 PE=4 SV=1
Gene Ontology
ID GO:0016788
description early nodulin 8 precursor family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_24922: 455544-457448
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002374_540 0.0 - - RecName: Full=Esterase; AltName: Full=Early nodule-specific protein homolog; AltName: Full=Latex allergen Hev b 13; AltName: Allergen=Hev b 13; Flags: Precursor [Hevea brasiliensis]
2 Hb_146255_010 0.0881376922 - - PREDICTED: uncharacterized protein LOC105643649 [Jatropha curcas]
3 Hb_001741_110 0.1128567039 rubber biosynthesis Gene Name: REF7 REF/SRPP-like protein [Glycine soja]
4 Hb_000313_080 0.1273129503 rubber biosynthesis Gene Name: CPT3 cis-prenyltransferase 3 [Hevea brasiliensis]
5 Hb_000087_010 0.1417764372 - - mta/sah nucleosidase, putative [Ricinus communis]
6 Hb_001396_270 0.174989156 - - 4-coumarate--CoA ligase family protein [Populus trichocarpa]
7 Hb_005357_170 0.1758171923 - - Pectinesterase precursor, putative [Ricinus communis]
8 Hb_001887_010 0.1765274781 - - mta/sah nucleosidase, putative [Ricinus communis]
9 Hb_004884_050 0.1769211219 - - PREDICTED: uncharacterized protein LOC105648112 [Jatropha curcas]
10 Hb_003685_070 0.180863896 - - RecName: Full=(S)-hydroxynitrile lyase; AltName: Full=(S)-acetone-cyanohydrin lyase; AltName: Full=Oxynitrilase [Hevea brasiliensis]
11 Hb_000392_060 0.1809385235 - - hypothetical protein JCGZ_11629 [Jatropha curcas]
12 Hb_097213_010 0.1830887658 - - PREDICTED: cytochrome P450 714C2-like [Populus euphratica]
13 Hb_006970_180 0.1884121678 - - PREDICTED: DNA-damage-repair/toleration protein DRT100-like [Jatropha curcas]
14 Hb_114310_030 0.1893989705 - - JHL18I08.8 [Jatropha curcas]
15 Hb_151436_010 0.1899411447 - - PREDICTED: uncharacterized protein LOC105137019 [Populus euphratica]
16 Hb_001433_230 0.1900095204 - - PREDICTED: kinesin-4-like [Jatropha curcas]
17 Hb_000352_210 0.1917911613 - - PREDICTED: xyloglucan endotransglucosylase/hydrolase 1 [Jatropha curcas]
18 Hb_000431_050 0.1918818261 - - conserved hypothetical protein [Ricinus communis]
19 Hb_006603_010 0.1921631609 - - neutral alpha-glucosidase ab precursor, putative [Ricinus communis]
20 Hb_000175_600 0.19220172 - - PREDICTED: TATA-binding protein-associated factor 2N isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_002374_540 Hb_002374_540 Hb_146255_010 Hb_146255_010 Hb_002374_540--Hb_146255_010 Hb_001741_110 Hb_001741_110 Hb_002374_540--Hb_001741_110 Hb_000313_080 Hb_000313_080 Hb_002374_540--Hb_000313_080 Hb_000087_010 Hb_000087_010 Hb_002374_540--Hb_000087_010 Hb_001396_270 Hb_001396_270 Hb_002374_540--Hb_001396_270 Hb_005357_170 Hb_005357_170 Hb_002374_540--Hb_005357_170 Hb_146255_010--Hb_000313_080 Hb_001887_010 Hb_001887_010 Hb_146255_010--Hb_001887_010 Hb_000392_060 Hb_000392_060 Hb_146255_010--Hb_000392_060 Hb_003685_070 Hb_003685_070 Hb_146255_010--Hb_003685_070 Hb_006061_030 Hb_006061_030 Hb_146255_010--Hb_006061_030 Hb_001741_110--Hb_000087_010 Hb_001741_110--Hb_146255_010 Hb_011169_010 Hb_011169_010 Hb_001741_110--Hb_011169_010 Hb_004884_050 Hb_004884_050 Hb_001741_110--Hb_004884_050 Hb_001741_110--Hb_000313_080 Hb_000313_080--Hb_003685_070 Hb_000313_080--Hb_005357_170 Hb_000313_080--Hb_001887_010 Hb_000313_080--Hb_006061_030 Hb_015978_020 Hb_015978_020 Hb_000313_080--Hb_015978_020 Hb_000087_010--Hb_004884_050 Hb_000087_010--Hb_011169_010 Hb_000115_210 Hb_000115_210 Hb_000087_010--Hb_000115_210 Hb_006889_010 Hb_006889_010 Hb_000087_010--Hb_006889_010 Hb_006012_030 Hb_006012_030 Hb_001396_270--Hb_006012_030 Hb_005914_220 Hb_005914_220 Hb_001396_270--Hb_005914_220 Hb_003988_020 Hb_003988_020 Hb_001396_270--Hb_003988_020 Hb_000042_120 Hb_000042_120 Hb_001396_270--Hb_000042_120 Hb_000270_590 Hb_000270_590 Hb_001396_270--Hb_000270_590 Hb_005357_170--Hb_003685_070 Hb_003765_010 Hb_003765_010 Hb_005357_170--Hb_003765_010 Hb_005357_170--Hb_001887_010 Hb_055276_010 Hb_055276_010 Hb_005357_170--Hb_055276_010 Hb_001433_230 Hb_001433_230 Hb_005357_170--Hb_001433_230 Hb_011224_030 Hb_011224_030 Hb_005357_170--Hb_011224_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
29.3522 3.07424 33.577 375.052 0.581008 1.13283
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.16787 0.0528251 0.297001 0.13718 19.0667

CAGE analysis