Hb_006061_030

Information

Type -
Description -
Location Contig6061: 21267-22645
Sequence    

Annotation

kegg
ID rcu:RCOM_1465180
description zinc/iron transporter, putative (EC:1.3.1.74)
nr
ID XP_012080572.1
description PREDICTED: fe(2+) transport protein 1-like [Jatropha curcas]
swissprot
ID Q75HB1
description Fe(2+) transport protein 1 OS=Oryza sativa subsp. japonica GN=IRT1 PE=2 SV=1
trembl
ID A0A067K5M6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11803 PE=4 SV=1
Gene Ontology
ID GO:0030001
description fe(2+) transport protein 1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006061_030 0.0 - - PREDICTED: fe(2+) transport protein 1-like [Jatropha curcas]
2 Hb_000313_080 0.1174908535 rubber biosynthesis Gene Name: CPT3 cis-prenyltransferase 3 [Hevea brasiliensis]
3 Hb_005614_060 0.1357277573 - - Uncharacterized protein TCM_019750 [Theobroma cacao]
4 Hb_000049_190 0.1389788637 - - nucleotide binding protein, putative [Ricinus communis]
5 Hb_005665_100 0.1415001367 - - PREDICTED: RING-H2 finger protein ATL63-like [Populus euphratica]
6 Hb_004899_230 0.1415731241 - - Indole-3-acetic acid-induced protein ARG7, putative [Ricinus communis]
7 Hb_001568_040 0.1437910727 - - conserved hypothetical protein [Ricinus communis]
8 Hb_018910_010 0.1461376346 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g36180-like isoform X3 [Citrus sinensis]
9 Hb_004440_030 0.1464699345 transcription factor TF Family: MYB-related hypothetical protein POPTR_0005s12390g [Populus trichocarpa]
10 Hb_011689_010 0.1500245578 - - PREDICTED: S-adenosylmethionine decarboxylase proenzyme 4 [Jatropha curcas]
11 Hb_000664_010 0.1510251778 - - PREDICTED: histidine-containing phosphotransfer protein 4-like [Jatropha curcas]
12 Hb_000227_290 0.1519986304 - - PREDICTED: uncharacterized protein LOC105631957 [Jatropha curcas]
13 Hb_029584_030 0.1550265233 - - hypothetical protein JCGZ_07310 [Jatropha curcas]
14 Hb_001357_110 0.1554373278 - - endo-1,4-beta-glucanase, putative [Ricinus communis]
15 Hb_050898_040 0.1560873906 - - -
16 Hb_001496_150 0.1570300507 - - PREDICTED: leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 [Jatropha curcas]
17 Hb_002471_310 0.157330923 - - PREDICTED: vacuolar iron transporter 1-like isoform X1 [Jatropha curcas]
18 Hb_029883_010 0.1575738991 - - Anthranilate N-benzoyltransferase protein, putative [Ricinus communis]
19 Hb_003685_070 0.1578348894 - - RecName: Full=(S)-hydroxynitrile lyase; AltName: Full=(S)-acetone-cyanohydrin lyase; AltName: Full=Oxynitrilase [Hevea brasiliensis]
20 Hb_005295_030 0.158414008 - - PREDICTED: uncharacterized protein LOC105645488 [Jatropha curcas]

Gene co-expression network

sample Hb_006061_030 Hb_006061_030 Hb_000313_080 Hb_000313_080 Hb_006061_030--Hb_000313_080 Hb_005614_060 Hb_005614_060 Hb_006061_030--Hb_005614_060 Hb_000049_190 Hb_000049_190 Hb_006061_030--Hb_000049_190 Hb_005665_100 Hb_005665_100 Hb_006061_030--Hb_005665_100 Hb_004899_230 Hb_004899_230 Hb_006061_030--Hb_004899_230 Hb_001568_040 Hb_001568_040 Hb_006061_030--Hb_001568_040 Hb_146255_010 Hb_146255_010 Hb_000313_080--Hb_146255_010 Hb_003685_070 Hb_003685_070 Hb_000313_080--Hb_003685_070 Hb_005357_170 Hb_005357_170 Hb_000313_080--Hb_005357_170 Hb_001887_010 Hb_001887_010 Hb_000313_080--Hb_001887_010 Hb_015978_020 Hb_015978_020 Hb_000313_080--Hb_015978_020 Hb_005614_060--Hb_005665_100 Hb_005614_060--Hb_000049_190 Hb_004440_030 Hb_004440_030 Hb_005614_060--Hb_004440_030 Hb_000664_010 Hb_000664_010 Hb_005614_060--Hb_000664_010 Hb_000227_290 Hb_000227_290 Hb_005614_060--Hb_000227_290 Hb_029584_030 Hb_029584_030 Hb_005614_060--Hb_029584_030 Hb_000049_190--Hb_001568_040 Hb_018910_010 Hb_018910_010 Hb_000049_190--Hb_018910_010 Hb_000049_190--Hb_005665_100 Hb_004693_040 Hb_004693_040 Hb_000049_190--Hb_004693_040 Hb_002308_040 Hb_002308_040 Hb_000049_190--Hb_002308_040 Hb_005665_100--Hb_000664_010 Hb_005665_100--Hb_018910_010 Hb_002471_310 Hb_002471_310 Hb_005665_100--Hb_002471_310 Hb_005665_100--Hb_002308_040 Hb_000005_290 Hb_000005_290 Hb_004899_230--Hb_000005_290 Hb_005295_030 Hb_005295_030 Hb_004899_230--Hb_005295_030 Hb_002276_080 Hb_002276_080 Hb_004899_230--Hb_002276_080 Hb_029883_010 Hb_029883_010 Hb_004899_230--Hb_029883_010 Hb_002092_060 Hb_002092_060 Hb_004899_230--Hb_002092_060 Hb_006977_010 Hb_006977_010 Hb_004899_230--Hb_006977_010 Hb_001568_040--Hb_018910_010 Hb_001568_040--Hb_005665_100 Hb_000020_170 Hb_000020_170 Hb_001568_040--Hb_000020_170 Hb_001568_040--Hb_004693_040 Hb_001568_040--Hb_005614_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0173357 0 0.0797919 0.325269 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.0645143

CAGE analysis