Hb_000664_010

Information

Type -
Description -
Location Contig664: 40875-42141
Sequence    

Annotation

kegg
ID rcu:RCOM_0801590
description Histidine-containing phosphotransfer protein, putative (EC:1.3.1.74)
nr
ID XP_012077395.1
description PREDICTED: histidine-containing phosphotransfer protein 4-like [Jatropha curcas]
swissprot
ID Q9LU15
description Histidine-containing phosphotransfer protein 4 OS=Arabidopsis thaliana GN=AHP4 PE=1 SV=2
trembl
ID B9RS10
description Histidine-containing phosphotransfer protein, putative OS=Ricinus communis GN=RCOM_0801590 PE=4 SV=1
Gene Ontology
ID GO:0004871
description histidine-containing phosphotransfer protein 4-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000664_010 0.0 - - PREDICTED: histidine-containing phosphotransfer protein 4-like [Jatropha curcas]
2 Hb_029584_030 0.0139518767 - - hypothetical protein JCGZ_07310 [Jatropha curcas]
3 Hb_005665_100 0.0340683056 - - PREDICTED: RING-H2 finger protein ATL63-like [Populus euphratica]
4 Hb_002471_310 0.0459016421 - - PREDICTED: vacuolar iron transporter 1-like isoform X1 [Jatropha curcas]
5 Hb_011224_030 0.0485070048 - - PREDICTED: oligopeptide transporter 1-like isoform X1 [Jatropha curcas]
6 Hb_002308_040 0.0486145008 - - methyladenine glycosylase family protein [Populus trichocarpa]
7 Hb_150179_010 0.0514767517 - - hypothetical protein JCGZ_21079 [Jatropha curcas]
8 Hb_000227_290 0.0574039108 - - PREDICTED: uncharacterized protein LOC105631957 [Jatropha curcas]
9 Hb_005614_060 0.0579659856 - - Uncharacterized protein TCM_019750 [Theobroma cacao]
10 Hb_001357_110 0.0645430053 - - endo-1,4-beta-glucanase, putative [Ricinus communis]
11 Hb_018910_010 0.0688806098 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g36180-like isoform X3 [Citrus sinensis]
12 Hb_004693_040 0.0717323164 - - -
13 Hb_000049_190 0.0727152295 - - nucleotide binding protein, putative [Ricinus communis]
14 Hb_007007_140 0.0753702967 transcription factor TF Family: MIKC PREDICTED: agamous-like MADS-box protein AGL6 [Jatropha curcas]
15 Hb_004225_010 0.0754927987 - - -
16 Hb_001557_030 0.0788482577 - - hypothetical protein CICLE_v10005306mg [Citrus clementina]
17 Hb_003685_070 0.0796932314 - - RecName: Full=(S)-hydroxynitrile lyase; AltName: Full=(S)-acetone-cyanohydrin lyase; AltName: Full=Oxynitrilase [Hevea brasiliensis]
18 Hb_024066_020 0.0805590028 - - P66 protein [Hevea brasiliensis]
19 Hb_004440_030 0.0818028445 transcription factor TF Family: MYB-related hypothetical protein POPTR_0005s12390g [Populus trichocarpa]
20 Hb_001308_010 0.0821935263 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_000664_010 Hb_000664_010 Hb_029584_030 Hb_029584_030 Hb_000664_010--Hb_029584_030 Hb_005665_100 Hb_005665_100 Hb_000664_010--Hb_005665_100 Hb_002471_310 Hb_002471_310 Hb_000664_010--Hb_002471_310 Hb_011224_030 Hb_011224_030 Hb_000664_010--Hb_011224_030 Hb_002308_040 Hb_002308_040 Hb_000664_010--Hb_002308_040 Hb_150179_010 Hb_150179_010 Hb_000664_010--Hb_150179_010 Hb_029584_030--Hb_150179_010 Hb_029584_030--Hb_005665_100 Hb_029584_030--Hb_011224_030 Hb_029584_030--Hb_002471_310 Hb_000227_290 Hb_000227_290 Hb_029584_030--Hb_000227_290 Hb_018910_010 Hb_018910_010 Hb_005665_100--Hb_018910_010 Hb_000049_190 Hb_000049_190 Hb_005665_100--Hb_000049_190 Hb_005614_060 Hb_005614_060 Hb_005665_100--Hb_005614_060 Hb_005665_100--Hb_002471_310 Hb_005665_100--Hb_002308_040 Hb_002471_310--Hb_002308_040 Hb_004693_040 Hb_004693_040 Hb_002471_310--Hb_004693_040 Hb_024066_020 Hb_024066_020 Hb_002471_310--Hb_024066_020 Hb_011224_030--Hb_150179_010 Hb_011224_030--Hb_002471_310 Hb_011224_030--Hb_002308_040 Hb_007007_140 Hb_007007_140 Hb_011224_030--Hb_007007_140 Hb_002308_040--Hb_004693_040 Hb_002308_040--Hb_018910_010 Hb_002308_040--Hb_007007_140 Hb_001557_030 Hb_001557_030 Hb_150179_010--Hb_001557_030 Hb_150179_010--Hb_007007_140 Hb_003685_070 Hb_003685_070 Hb_150179_010--Hb_003685_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.293686 1.86883 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.290027

CAGE analysis