Hb_150179_010

Information

Type -
Description -
Location Contig150179: 641-826
Sequence    

Annotation

kegg
ID -
description -
nr
ID KDP26046.1
description hypothetical protein JCGZ_21079 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JQ09
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21079 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_150179_010 0.0 - - hypothetical protein JCGZ_21079 [Jatropha curcas]
2 Hb_011224_030 0.04190314 - - PREDICTED: oligopeptide transporter 1-like isoform X1 [Jatropha curcas]
3 Hb_001557_030 0.0425342032 - - hypothetical protein CICLE_v10005306mg [Citrus clementina]
4 Hb_029584_030 0.0469926242 - - hypothetical protein JCGZ_07310 [Jatropha curcas]
5 Hb_000664_010 0.0514767517 - - PREDICTED: histidine-containing phosphotransfer protein 4-like [Jatropha curcas]
6 Hb_007007_140 0.0576431303 transcription factor TF Family: MIKC PREDICTED: agamous-like MADS-box protein AGL6 [Jatropha curcas]
7 Hb_003685_070 0.0628067895 - - RecName: Full=(S)-hydroxynitrile lyase; AltName: Full=(S)-acetone-cyanohydrin lyase; AltName: Full=Oxynitrilase [Hevea brasiliensis]
8 Hb_002471_310 0.066425527 - - PREDICTED: vacuolar iron transporter 1-like isoform X1 [Jatropha curcas]
9 Hb_002308_040 0.0670043482 - - methyladenine glycosylase family protein [Populus trichocarpa]
10 Hb_001887_010 0.0694212621 - - mta/sah nucleosidase, putative [Ricinus communis]
11 Hb_024066_020 0.0694780112 - - P66 protein [Hevea brasiliensis]
12 Hb_004957_010 0.0715304386 - - PREDICTED: probable aquaporin NIP-type [Prunus mume]
13 Hb_003754_010 0.0719605556 - - hypothetical protein POPTR_0019s09950g [Populus trichocarpa]
14 Hb_014834_100 0.0727834406 - - PREDICTED: probable aquaporin TIP-type [Gossypium raimondii]
15 Hb_004732_080 0.0776431815 - - PREDICTED: germin-like protein subfamily 3 member 2 [Populus euphratica]
16 Hb_004396_020 0.0793106383 - - SAUR-like auxin-responsive protein family [Theobroma cacao]
17 Hb_002073_210 0.0797156044 - - conserved hypothetical protein [Ricinus communis]
18 Hb_005665_100 0.0806227001 - - PREDICTED: RING-H2 finger protein ATL63-like [Populus euphratica]
19 Hb_001308_010 0.0863577582 - - conserved hypothetical protein [Ricinus communis]
20 Hb_000331_380 0.089572339 - - hypothetical protein POPTR_0012s09560g [Populus trichocarpa]

Gene co-expression network

sample Hb_150179_010 Hb_150179_010 Hb_011224_030 Hb_011224_030 Hb_150179_010--Hb_011224_030 Hb_001557_030 Hb_001557_030 Hb_150179_010--Hb_001557_030 Hb_029584_030 Hb_029584_030 Hb_150179_010--Hb_029584_030 Hb_000664_010 Hb_000664_010 Hb_150179_010--Hb_000664_010 Hb_007007_140 Hb_007007_140 Hb_150179_010--Hb_007007_140 Hb_003685_070 Hb_003685_070 Hb_150179_010--Hb_003685_070 Hb_011224_030--Hb_000664_010 Hb_011224_030--Hb_029584_030 Hb_002471_310 Hb_002471_310 Hb_011224_030--Hb_002471_310 Hb_002308_040 Hb_002308_040 Hb_011224_030--Hb_002308_040 Hb_011224_030--Hb_007007_140 Hb_014834_100 Hb_014834_100 Hb_001557_030--Hb_014834_100 Hb_001557_030--Hb_011224_030 Hb_001557_030--Hb_007007_140 Hb_001887_010 Hb_001887_010 Hb_001557_030--Hb_001887_010 Hb_001557_030--Hb_029584_030 Hb_029584_030--Hb_000664_010 Hb_005665_100 Hb_005665_100 Hb_029584_030--Hb_005665_100 Hb_029584_030--Hb_002471_310 Hb_000227_290 Hb_000227_290 Hb_029584_030--Hb_000227_290 Hb_000664_010--Hb_005665_100 Hb_000664_010--Hb_002471_310 Hb_000664_010--Hb_002308_040 Hb_024066_020 Hb_024066_020 Hb_007007_140--Hb_024066_020 Hb_004396_020 Hb_004396_020 Hb_007007_140--Hb_004396_020 Hb_004732_080 Hb_004732_080 Hb_007007_140--Hb_004732_080 Hb_007007_140--Hb_002308_040 Hb_007007_140--Hb_002471_310 Hb_003685_070--Hb_001887_010 Hb_003685_070--Hb_011224_030 Hb_003685_070--Hb_007007_140 Hb_005357_170 Hb_005357_170 Hb_003685_070--Hb_005357_170 Hb_003685_070--Hb_024066_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 3.18984 28.8651 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 3.57036

CAGE analysis