Hb_041188_010

Information

Type -
Description -
Location Contig41188: 3-572
Sequence    

Annotation

kegg
ID cit:102629948
description O-acyltransferase WSD1-like
nr
ID XP_009630816.1
description PREDICTED: O-acyltransferase WSD1-like [Nicotiana tomentosiformis]
swissprot
ID Q93ZR6
description O-acyltransferase WSD1 OS=Arabidopsis thaliana GN=WSD1 PE=2 SV=1
trembl
ID A0A0B0PTU2
description O-acyltransferase WSD1-like protein OS=Gossypium arboreum GN=F383_03373 PE=4 SV=1
Gene Ontology
ID GO:0016746
description o-acyltransferase wsd1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_041188_010 0.0 - - PREDICTED: O-acyltransferase WSD1-like [Nicotiana tomentosiformis]
2 Hb_025526_110 0.0033375073 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 [Jatropha curcas]
3 Hb_020712_020 0.0121724814 transcription factor TF Family: SET PREDICTED: histone-lysine N-methyltransferase ATX4 [Elaeis guineensis]
4 Hb_000355_020 0.0214086813 - - -
5 Hb_001278_010 0.0237804393 - - conserved hypothetical protein [Ricinus communis]
6 Hb_154146_010 0.0442310765 - - hypothetical protein JCGZ_00346 [Jatropha curcas]
7 Hb_001304_150 0.0470664475 - - hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis]
8 Hb_031546_010 0.0485139481 - - hypothetical protein JCGZ_21533 [Jatropha curcas]
9 Hb_000313_240 0.0590106233 - - hypothetical protein RCOM_0377590 [Ricinus communis]
10 Hb_012090_010 0.0595377048 - - hypothetical protein RCOM_0904330 [Ricinus communis]
11 Hb_092416_020 0.0597207428 - - protein with unknown function [Ricinus communis]
12 Hb_000331_600 0.062345868 - - PREDICTED: probable Ufm1-specific protease [Jatropha curcas]
13 Hb_001946_420 0.063236397 - - protein with unknown function [Ricinus communis]
14 Hb_002092_050 0.0650306687 - - hypothetical protein JCGZ_05877 [Jatropha curcas]
15 Hb_065272_010 0.0692575582 - - hypothetical protein JCGZ_06349 [Jatropha curcas]
16 Hb_000029_240 0.0743673841 - - PREDICTED: pre-mRNA-splicing factor SLU7-A-like [Elaeis guineensis]
17 Hb_000056_140 0.0791410305 transcription factor TF Family: bHLH PREDICTED: transcription factor PRE6 [Vitis vinifera]
18 Hb_025161_040 0.0809260031 - - kinase, putative [Ricinus communis]
19 Hb_001688_040 0.082421882 - - conserved hypothetical protein [Ricinus communis]
20 Hb_002368_120 0.0826359381 - - hypothetical protein VITISV_033181 [Vitis vinifera]

Gene co-expression network

sample Hb_041188_010 Hb_041188_010 Hb_025526_110 Hb_025526_110 Hb_041188_010--Hb_025526_110 Hb_020712_020 Hb_020712_020 Hb_041188_010--Hb_020712_020 Hb_000355_020 Hb_000355_020 Hb_041188_010--Hb_000355_020 Hb_001278_010 Hb_001278_010 Hb_041188_010--Hb_001278_010 Hb_154146_010 Hb_154146_010 Hb_041188_010--Hb_154146_010 Hb_001304_150 Hb_001304_150 Hb_041188_010--Hb_001304_150 Hb_025526_110--Hb_020712_020 Hb_025526_110--Hb_000355_020 Hb_025526_110--Hb_001278_010 Hb_025526_110--Hb_154146_010 Hb_025526_110--Hb_001304_150 Hb_020712_020--Hb_000355_020 Hb_020712_020--Hb_001278_010 Hb_020712_020--Hb_154146_010 Hb_020712_020--Hb_001304_150 Hb_000355_020--Hb_001278_010 Hb_000355_020--Hb_154146_010 Hb_000355_020--Hb_001304_150 Hb_001278_010--Hb_154146_010 Hb_001278_010--Hb_001304_150 Hb_154146_010--Hb_001304_150 Hb_000313_240 Hb_000313_240 Hb_154146_010--Hb_000313_240 Hb_012090_010 Hb_012090_010 Hb_154146_010--Hb_012090_010 Hb_000331_600 Hb_000331_600 Hb_154146_010--Hb_000331_600 Hb_002092_050 Hb_002092_050 Hb_154146_010--Hb_002092_050 Hb_001304_150--Hb_000313_240 Hb_001304_150--Hb_012090_010 Hb_001304_150--Hb_000331_600 Hb_001304_150--Hb_002092_050 Hb_065272_010 Hb_065272_010 Hb_001304_150--Hb_065272_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 1.59602 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.108682 0

CAGE analysis