Hb_002092_050

Information

Type -
Description -
Location Contig2092: 38984-41310
Sequence    

Annotation

kegg
ID sly:101259918
description uncharacterized LOC101259918
nr
ID KDP20108.1
description hypothetical protein JCGZ_05877 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JBK2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05877 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002092_050 0.0 - - hypothetical protein JCGZ_05877 [Jatropha curcas]
2 Hb_000331_600 0.0027040588 - - PREDICTED: probable Ufm1-specific protease [Jatropha curcas]
3 Hb_065272_010 0.0042599631 - - hypothetical protein JCGZ_06349 [Jatropha curcas]
4 Hb_012090_010 0.0055308703 - - hypothetical protein RCOM_0904330 [Ricinus communis]
5 Hb_000313_240 0.0060612788 - - hypothetical protein RCOM_0377590 [Ricinus communis]
6 Hb_000029_240 0.0094141173 - - PREDICTED: pre-mRNA-splicing factor SLU7-A-like [Elaeis guineensis]
7 Hb_025161_040 0.0160362941 - - kinase, putative [Ricinus communis]
8 Hb_001304_150 0.0180655203 - - hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis]
9 Hb_154146_010 0.0209106504 - - hypothetical protein JCGZ_00346 [Jatropha curcas]
10 Hb_002391_060 0.0274953515 - - PREDICTED: uncharacterized protein LOC100853799 [Vitis vinifera]
11 Hb_051677_010 0.0282924578 - - Uncharacterized protein TCM_017953 [Theobroma cacao]
12 Hb_007455_010 0.0319428864 - - PREDICTED: uncharacterized protein LOC105800996 [Gossypium raimondii]
13 Hb_001278_010 0.041375327 - - conserved hypothetical protein [Ricinus communis]
14 Hb_000355_020 0.0437418489 - - -
15 Hb_002792_040 0.0469056424 - - -
16 Hb_002281_030 0.0512972909 - - -
17 Hb_020712_020 0.0529428593 transcription factor TF Family: SET PREDICTED: histone-lysine N-methyltransferase ATX4 [Elaeis guineensis]
18 Hb_025526_110 0.0617209166 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 [Jatropha curcas]
19 Hb_041188_010 0.0650306687 - - PREDICTED: O-acyltransferase WSD1-like [Nicotiana tomentosiformis]
20 Hb_000552_040 0.0654577629 - - -

Gene co-expression network

sample Hb_002092_050 Hb_002092_050 Hb_000331_600 Hb_000331_600 Hb_002092_050--Hb_000331_600 Hb_065272_010 Hb_065272_010 Hb_002092_050--Hb_065272_010 Hb_012090_010 Hb_012090_010 Hb_002092_050--Hb_012090_010 Hb_000313_240 Hb_000313_240 Hb_002092_050--Hb_000313_240 Hb_000029_240 Hb_000029_240 Hb_002092_050--Hb_000029_240 Hb_025161_040 Hb_025161_040 Hb_002092_050--Hb_025161_040 Hb_000331_600--Hb_012090_010 Hb_000331_600--Hb_000313_240 Hb_000331_600--Hb_065272_010 Hb_000331_600--Hb_000029_240 Hb_001304_150 Hb_001304_150 Hb_000331_600--Hb_001304_150 Hb_065272_010--Hb_000029_240 Hb_065272_010--Hb_012090_010 Hb_065272_010--Hb_000313_240 Hb_065272_010--Hb_025161_040 Hb_012090_010--Hb_000313_240 Hb_012090_010--Hb_001304_150 Hb_012090_010--Hb_000029_240 Hb_000313_240--Hb_001304_150 Hb_154146_010 Hb_154146_010 Hb_000313_240--Hb_154146_010 Hb_000029_240--Hb_025161_040 Hb_000029_240--Hb_000313_240 Hb_002391_060 Hb_002391_060 Hb_025161_040--Hb_002391_060 Hb_051677_010 Hb_051677_010 Hb_025161_040--Hb_051677_010 Hb_007455_010 Hb_007455_010 Hb_025161_040--Hb_007455_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0.284744 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0338523 0

CAGE analysis