Hb_025161_040

Information

Type -
Description -
Location Contig25161: 19595-19909
Sequence    

Annotation

kegg
ID rcu:RCOM_1579740
description kinase, putative
nr
ID XP_002513567.1
description kinase, putative [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9RIJ8
description Kinase, putative OS=Ricinus communis GN=RCOM_1579740 PE=3 SV=1
Gene Ontology
ID GO:0004674
description probable receptor-like protein kinase at1g67000

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_025161_040 0.0 - - kinase, putative [Ricinus communis]
2 Hb_000029_240 0.0066235658 - - PREDICTED: pre-mRNA-splicing factor SLU7-A-like [Elaeis guineensis]
3 Hb_002391_060 0.0114657827 - - PREDICTED: uncharacterized protein LOC100853799 [Vitis vinifera]
4 Hb_065272_010 0.0117774625 - - hypothetical protein JCGZ_06349 [Jatropha curcas]
5 Hb_051677_010 0.0122635515 - - Uncharacterized protein TCM_017953 [Theobroma cacao]
6 Hb_007455_010 0.0159173252 - - PREDICTED: uncharacterized protein LOC105800996 [Gossypium raimondii]
7 Hb_002092_050 0.0160362941 - - hypothetical protein JCGZ_05877 [Jatropha curcas]
8 Hb_000331_600 0.0187391906 - - PREDICTED: probable Ufm1-specific protease [Jatropha curcas]
9 Hb_012090_010 0.0215644098 - - hypothetical protein RCOM_0904330 [Ricinus communis]
10 Hb_000313_240 0.0220944759 - - hypothetical protein RCOM_0377590 [Ricinus communis]
11 Hb_002792_040 0.0308988857 - - -
12 Hb_001304_150 0.0340871489 - - hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis]
13 Hb_002281_030 0.0352975224 - - -
14 Hb_154146_010 0.0369284251 - - hypothetical protein JCGZ_00346 [Jatropha curcas]
15 Hb_000552_040 0.049484705 - - -
16 Hb_001950_050 0.0561695599 - - -
17 Hb_001278_010 0.0573517454 - - conserved hypothetical protein [Ricinus communis]
18 Hb_000355_020 0.0597118461 - - -
19 Hb_020712_020 0.0688844181 transcription factor TF Family: SET PREDICTED: histone-lysine N-methyltransferase ATX4 [Elaeis guineensis]
20 Hb_033273_010 0.0698060622 - - -

Gene co-expression network

sample Hb_025161_040 Hb_025161_040 Hb_000029_240 Hb_000029_240 Hb_025161_040--Hb_000029_240 Hb_002391_060 Hb_002391_060 Hb_025161_040--Hb_002391_060 Hb_065272_010 Hb_065272_010 Hb_025161_040--Hb_065272_010 Hb_051677_010 Hb_051677_010 Hb_025161_040--Hb_051677_010 Hb_007455_010 Hb_007455_010 Hb_025161_040--Hb_007455_010 Hb_002092_050 Hb_002092_050 Hb_025161_040--Hb_002092_050 Hb_000029_240--Hb_065272_010 Hb_000029_240--Hb_002092_050 Hb_000331_600 Hb_000331_600 Hb_000029_240--Hb_000331_600 Hb_012090_010 Hb_012090_010 Hb_000029_240--Hb_012090_010 Hb_000313_240 Hb_000313_240 Hb_000029_240--Hb_000313_240 Hb_002391_060--Hb_051677_010 Hb_002391_060--Hb_007455_010 Hb_002391_060--Hb_000029_240 Hb_002792_040 Hb_002792_040 Hb_002391_060--Hb_002792_040 Hb_002391_060--Hb_065272_010 Hb_065272_010--Hb_002092_050 Hb_065272_010--Hb_000331_600 Hb_065272_010--Hb_012090_010 Hb_065272_010--Hb_000313_240 Hb_051677_010--Hb_007455_010 Hb_051677_010--Hb_002792_040 Hb_051677_010--Hb_000029_240 Hb_002281_030 Hb_002281_030 Hb_051677_010--Hb_002281_030 Hb_007455_010--Hb_002792_040 Hb_007455_010--Hb_002281_030 Hb_007455_010--Hb_000029_240 Hb_002092_050--Hb_000331_600 Hb_002092_050--Hb_012090_010 Hb_002092_050--Hb_000313_240
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0.896142 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.120089 0

CAGE analysis