Hb_082733_010

Information

Type -
Description -
Location Contig82733: 5-425
Sequence    

Annotation

kegg
ID vvi:100251041
description germin-like protein subfamily 1 member 7
nr
ID KDP23767.1
description hypothetical protein JCGZ_23600 [Jatropha curcas]
swissprot
ID P92997
description Germin-like protein subfamily 1 member 13 OS=Arabidopsis thaliana GN=GLP6 PE=2 SV=2
trembl
ID A0A067JIT2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23600 PE=4 SV=1
Gene Ontology
ID GO:0005576
description germin-like protein subfamily 1 member 7

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_082733_010 0.0 - - hypothetical protein JCGZ_23600 [Jatropha curcas]
2 Hb_007007_020 0.0702456979 - - conserved hypothetical protein [Ricinus communis]
3 Hb_002413_030 0.0835822647 - - sulfate transporter, putative [Ricinus communis]
4 Hb_060236_010 0.0918322606 - - hypothetical protein JCGZ_26099 [Jatropha curcas]
5 Hb_059226_020 0.1091478281 - - hypothetical protein B456_008G287700 [Gossypium raimondii]
6 Hb_041063_010 0.1200576223 - - Disease resistance protein RFL1, putative [Ricinus communis]
7 Hb_001091_010 0.1234813667 - - PREDICTED: putative disease resistance protein RGA4 isoform X2 [Malus domestica]
8 Hb_004241_050 0.1238105808 - - Indole-3-acetic acid-amido synthetase GH3.6, putative [Ricinus communis]
9 Hb_081191_010 0.1291435121 - - PREDICTED: pathogenesis-related protein PR-1-like [Jatropha curcas]
10 Hb_004397_010 0.1354828873 - - Receptor protein kinase CLAVATA1 precursor, putative [Ricinus communis]
11 Hb_159012_010 0.1363333369 - - PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At5g06940 [Jatropha curcas]
12 Hb_000046_250 0.1388178624 - - conserved hypothetical protein [Ricinus communis]
13 Hb_003057_040 0.1440239861 - - PREDICTED: salt stress-induced hydrophobic peptide ESI3 [Vitis vinifera]
14 Hb_002054_090 0.1468194445 - - PREDICTED: 36.4 kDa proline-rich protein-like [Gossypium raimondii]
15 Hb_014096_010 0.1484372194 - - Aspartic proteinase nepenthesin-1 precursor, putative [Ricinus communis]
16 Hb_131417_010 0.1488641071 - - hypothetical protein POPTR_0011s066602g, partial [Populus trichocarpa]
17 Hb_006326_020 0.1510456087 - - -
18 Hb_023714_010 0.1519177633 - - hypothetical protein B456_007G377100 [Gossypium raimondii]
19 Hb_000098_210 0.1559329757 - - PREDICTED: uncharacterized protein LOC105633345 [Jatropha curcas]
20 Hb_000429_030 0.1569475009 - - Receptor protein kinase CLAVATA1 precursor, putative [Ricinus communis]

Gene co-expression network

sample Hb_082733_010 Hb_082733_010 Hb_007007_020 Hb_007007_020 Hb_082733_010--Hb_007007_020 Hb_002413_030 Hb_002413_030 Hb_082733_010--Hb_002413_030 Hb_060236_010 Hb_060236_010 Hb_082733_010--Hb_060236_010 Hb_059226_020 Hb_059226_020 Hb_082733_010--Hb_059226_020 Hb_041063_010 Hb_041063_010 Hb_082733_010--Hb_041063_010 Hb_001091_010 Hb_001091_010 Hb_082733_010--Hb_001091_010 Hb_007007_020--Hb_002413_030 Hb_007007_020--Hb_060236_010 Hb_006326_020 Hb_006326_020 Hb_007007_020--Hb_006326_020 Hb_003057_040 Hb_003057_040 Hb_007007_020--Hb_003057_040 Hb_007007_020--Hb_001091_010 Hb_000046_250 Hb_000046_250 Hb_002413_030--Hb_000046_250 Hb_023714_010 Hb_023714_010 Hb_002413_030--Hb_023714_010 Hb_002413_030--Hb_041063_010 Hb_002413_030--Hb_003057_040 Hb_004241_050 Hb_004241_050 Hb_060236_010--Hb_004241_050 Hb_000563_620 Hb_000563_620 Hb_060236_010--Hb_000563_620 Hb_060236_010--Hb_041063_010 Hb_002054_090 Hb_002054_090 Hb_060236_010--Hb_002054_090 Hb_004397_010 Hb_004397_010 Hb_059226_020--Hb_004397_010 Hb_039946_040 Hb_039946_040 Hb_059226_020--Hb_039946_040 Hb_066207_020 Hb_066207_020 Hb_059226_020--Hb_066207_020 Hb_030088_010 Hb_030088_010 Hb_059226_020--Hb_030088_010 Hb_004330_060 Hb_004330_060 Hb_059226_020--Hb_004330_060 Hb_000032_330 Hb_000032_330 Hb_041063_010--Hb_000032_330 Hb_000098_210 Hb_000098_210 Hb_041063_010--Hb_000098_210 Hb_041063_010--Hb_004241_050 Hb_041063_010--Hb_002054_090 Hb_131417_010 Hb_131417_010 Hb_041063_010--Hb_131417_010 Hb_000421_150 Hb_000421_150 Hb_001091_010--Hb_000421_150 Hb_007101_240 Hb_007101_240 Hb_001091_010--Hb_007101_240 Hb_010681_020 Hb_010681_020 Hb_001091_010--Hb_010681_020 Hb_000483_290 Hb_000483_290 Hb_001091_010--Hb_000483_290
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 30.4488 28.593 565.217 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 192.539 3.00379

CAGE analysis