Hb_023714_010

Information

Type -
Description -
Location Contig23714: 329-771
Sequence    

Annotation

kegg
ID rcu:RCOM_1158010
description aldo-keto reductase, putative (EC:1.1.1.21)
nr
ID KJB46605.1
description hypothetical protein B456_007G377100 [Gossypium raimondii]
swissprot
ID O80944
description Aldo-keto reductase family 4 member C8 OS=Arabidopsis thaliana GN=AKR4C8 PE=1 SV=2
trembl
ID A0A0D2TTA3
description Gossypium raimondii chromosome 7, whole genome shotgun sequence OS=Gossypium raimondii GN=B456_007G377100 PE=4 SV=1
Gene Ontology
ID GO:0016491
description aldo-keto reductase family 4 member c9

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_023714_010 0.0 - - hypothetical protein B456_007G377100 [Gossypium raimondii]
2 Hb_003057_040 0.0433754903 - - PREDICTED: salt stress-induced hydrophobic peptide ESI3 [Vitis vinifera]
3 Hb_006275_040 0.0905758736 - - PREDICTED: V-type proton ATPase subunit a3-like [Jatropha curcas]
4 Hb_000329_570 0.106514055 - - -
5 Hb_001300_060 0.107573514 - - PREDICTED: monothiol glutaredoxin-S6-like [Jatropha curcas]
6 Hb_002413_030 0.1128963187 - - sulfate transporter, putative [Ricinus communis]
7 Hb_007007_020 0.1195300022 - - conserved hypothetical protein [Ricinus communis]
8 Hb_000046_250 0.1369789248 - - conserved hypothetical protein [Ricinus communis]
9 Hb_010308_010 0.1401024134 - - hypothetical protein JCGZ_22818 [Jatropha curcas]
10 Hb_000496_080 0.1404645284 - - Proteinase inhibitor, putative [Ricinus communis]
11 Hb_004330_050 0.1440582185 - - conserved hypothetical protein [Ricinus communis]
12 Hb_004785_150 0.1460284071 - - hypothetical protein JCGZ_25207 [Jatropha curcas]
13 Hb_004634_010 0.1470528151 - - hypothetical protein POPTR_0002s23100g [Populus trichocarpa]
14 Hb_099777_010 0.1470651453 - - PREDICTED: uncharacterized protein LOC104884611 [Beta vulgaris subsp. vulgaris]
15 Hb_007017_130 0.1471027207 - - PREDICTED: glycerol-3-phosphate 2-O-acyltransferase 6-like isoform X1 [Populus euphratica]
16 Hb_001975_170 0.1471260534 - - PREDICTED: vacuolar protein sorting-associated protein 26A [Nelumbo nucifera]
17 Hb_000996_090 0.1477191789 transcription factor TF Family: NF-YC ccaat-binding transcription factor, putative [Ricinus communis]
18 Hb_000967_070 0.1479162556 - - rubber peroxidase 1 [Hevea brasiliensis]
19 Hb_020112_010 0.1482526982 - - acyltransferase, putative [Ricinus communis]
20 Hb_003589_040 0.1488607842 - - hypothetical protein JCGZ_01204 [Jatropha curcas]

Gene co-expression network

sample Hb_023714_010 Hb_023714_010 Hb_003057_040 Hb_003057_040 Hb_023714_010--Hb_003057_040 Hb_006275_040 Hb_006275_040 Hb_023714_010--Hb_006275_040 Hb_000329_570 Hb_000329_570 Hb_023714_010--Hb_000329_570 Hb_001300_060 Hb_001300_060 Hb_023714_010--Hb_001300_060 Hb_002413_030 Hb_002413_030 Hb_023714_010--Hb_002413_030 Hb_007007_020 Hb_007007_020 Hb_023714_010--Hb_007007_020 Hb_003057_040--Hb_006275_040 Hb_003057_040--Hb_007007_020 Hb_003057_040--Hb_001300_060 Hb_005144_140 Hb_005144_140 Hb_003057_040--Hb_005144_140 Hb_003057_040--Hb_002413_030 Hb_006275_040--Hb_001300_060 Hb_006275_040--Hb_005144_140 Hb_000917_070 Hb_000917_070 Hb_006275_040--Hb_000917_070 Hb_010308_010 Hb_010308_010 Hb_006275_040--Hb_010308_010 Hb_000329_570--Hb_001300_060 Hb_020112_010 Hb_020112_010 Hb_000329_570--Hb_020112_010 Hb_000496_080 Hb_000496_080 Hb_000329_570--Hb_000496_080 Hb_000329_570--Hb_010308_010 Hb_004785_150 Hb_004785_150 Hb_000329_570--Hb_004785_150 Hb_004330_050 Hb_004330_050 Hb_000329_570--Hb_004330_050 Hb_001300_060--Hb_010308_010 Hb_001300_060--Hb_000496_080 Hb_001300_060--Hb_004330_050 Hb_001300_060--Hb_020112_010 Hb_002413_030--Hb_007007_020 Hb_082733_010 Hb_082733_010 Hb_002413_030--Hb_082733_010 Hb_000046_250 Hb_000046_250 Hb_002413_030--Hb_000046_250 Hb_041063_010 Hb_041063_010 Hb_002413_030--Hb_041063_010 Hb_007007_020--Hb_082733_010 Hb_060236_010 Hb_060236_010 Hb_007007_020--Hb_060236_010 Hb_006326_020 Hb_006326_020 Hb_007007_020--Hb_006326_020 Hb_001091_010 Hb_001091_010 Hb_007007_020--Hb_001091_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.18708 2.92432 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 1.28376 0

CAGE analysis