Hb_060236_010

Information

Type -
Description -
Location Contig60236: 1-601
Sequence    

Annotation

kegg
ID pop:POPTR_0015s13020g
description POPTRDRAFT_575832; hypothetical protein
nr
ID KDP22268.1
description hypothetical protein JCGZ_26099 [Jatropha curcas]
swissprot
ID Q7XHW5
description Cytochrome P450 714B1 OS=Oryza sativa subsp. japonica GN=CYP714B1 PE=1 SV=2
trembl
ID A0A067JHL7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26099 PE=3 SV=1
Gene Ontology
ID GO:0004497
description cytokinin hydroxylase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_060236_010 0.0 - - hypothetical protein JCGZ_26099 [Jatropha curcas]
2 Hb_082733_010 0.0918322606 - - hypothetical protein JCGZ_23600 [Jatropha curcas]
3 Hb_004241_050 0.0960888784 - - Indole-3-acetic acid-amido synthetase GH3.6, putative [Ricinus communis]
4 Hb_000563_620 0.0989820733 - - hypothetical protein JCGZ_18889 [Jatropha curcas]
5 Hb_041063_010 0.0995001616 - - Disease resistance protein RFL1, putative [Ricinus communis]
6 Hb_007007_020 0.1115995691 - - conserved hypothetical protein [Ricinus communis]
7 Hb_002054_090 0.1214503907 - - PREDICTED: 36.4 kDa proline-rich protein-like [Gossypium raimondii]
8 Hb_159012_010 0.125419535 - - PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At5g06940 [Jatropha curcas]
9 Hb_002413_030 0.1399639521 - - sulfate transporter, putative [Ricinus communis]
10 Hb_000480_050 0.1508733415 - - hypothetical protein PHAVU_004G154200g [Phaseolus vulgaris]
11 Hb_006326_020 0.1526535235 - - -
12 Hb_000059_110 0.1557015822 transcription factor TF Family: MYB MYB transcriptional factor [Populus tremula x Populus tremuloides]
13 Hb_131417_010 0.1557459645 - - hypothetical protein POPTR_0011s066602g, partial [Populus trichocarpa]
14 Hb_002999_010 0.1588881385 - - PREDICTED: extracellular ribonuclease LE-like [Vitis vinifera]
15 Hb_001091_010 0.1595526357 - - PREDICTED: putative disease resistance protein RGA4 isoform X2 [Malus domestica]
16 Hb_059226_020 0.1619040223 - - hypothetical protein B456_008G287700 [Gossypium raimondii]
17 Hb_004926_010 0.1653683294 - - hypothetical protein JCGZ_27059 [Jatropha curcas]
18 Hb_004631_030 0.1689066043 - - PREDICTED: putative clathrin assembly protein At4g40080 [Jatropha curcas]
19 Hb_000194_030 0.1696287212 transcription factor TF Family: NAC NAC transcription factor 059 [Jatropha curcas]
20 Hb_000098_210 0.1698233558 - - PREDICTED: uncharacterized protein LOC105633345 [Jatropha curcas]

Gene co-expression network

sample Hb_060236_010 Hb_060236_010 Hb_082733_010 Hb_082733_010 Hb_060236_010--Hb_082733_010 Hb_004241_050 Hb_004241_050 Hb_060236_010--Hb_004241_050 Hb_000563_620 Hb_000563_620 Hb_060236_010--Hb_000563_620 Hb_041063_010 Hb_041063_010 Hb_060236_010--Hb_041063_010 Hb_007007_020 Hb_007007_020 Hb_060236_010--Hb_007007_020 Hb_002054_090 Hb_002054_090 Hb_060236_010--Hb_002054_090 Hb_082733_010--Hb_007007_020 Hb_002413_030 Hb_002413_030 Hb_082733_010--Hb_002413_030 Hb_059226_020 Hb_059226_020 Hb_082733_010--Hb_059226_020 Hb_082733_010--Hb_041063_010 Hb_001091_010 Hb_001091_010 Hb_082733_010--Hb_001091_010 Hb_004241_050--Hb_041063_010 Hb_000059_110 Hb_000059_110 Hb_004241_050--Hb_000059_110 Hb_001115_010 Hb_001115_010 Hb_004241_050--Hb_001115_010 Hb_004241_050--Hb_082733_010 Hb_004241_050--Hb_000563_620 Hb_006326_020 Hb_006326_020 Hb_000563_620--Hb_006326_020 Hb_000563_620--Hb_007007_020 Hb_000146_100 Hb_000146_100 Hb_000563_620--Hb_000146_100 Hb_000563_620--Hb_041063_010 Hb_000032_330 Hb_000032_330 Hb_041063_010--Hb_000032_330 Hb_000098_210 Hb_000098_210 Hb_041063_010--Hb_000098_210 Hb_041063_010--Hb_002054_090 Hb_131417_010 Hb_131417_010 Hb_041063_010--Hb_131417_010 Hb_007007_020--Hb_002413_030 Hb_007007_020--Hb_006326_020 Hb_003057_040 Hb_003057_040 Hb_007007_020--Hb_003057_040 Hb_007007_020--Hb_001091_010 Hb_004631_030 Hb_004631_030 Hb_002054_090--Hb_004631_030 Hb_000297_220 Hb_000297_220 Hb_002054_090--Hb_000297_220 Hb_002054_090--Hb_004241_050 Hb_002054_090--Hb_000059_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.19709 0.0516719 2.01317 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.56895 0

CAGE analysis