Hb_000098_210

Information

Type -
Description -
Location Contig98: 202241-203569
Sequence    

Annotation

kegg
ID rcu:RCOM_0406570
description hypothetical protein
nr
ID XP_012071313.1
description PREDICTED: uncharacterized protein LOC105633345 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KRK3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04998 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000098_210 0.0 - - PREDICTED: uncharacterized protein LOC105633345 [Jatropha curcas]
2 Hb_000032_330 0.0746072769 - - conserved hypothetical protein [Ricinus communis]
3 Hb_004875_040 0.096870345 - - PREDICTED: uncharacterized protein LOC105645797 [Jatropha curcas]
4 Hb_041063_010 0.1022715672 - - Disease resistance protein RFL1, putative [Ricinus communis]
5 Hb_148817_010 0.112971254 - - PREDICTED: CASP-like protein 1D1 [Jatropha curcas]
6 Hb_003171_070 0.1166246057 - - PREDICTED: protein TRANSPARENT TESTA 12-like [Citrus sinensis]
7 Hb_003371_040 0.1252264699 - - PREDICTED: uncharacterized protein LOC105650327 [Jatropha curcas]
8 Hb_000676_380 0.1289188662 - - cytochrome P450 family protein [Populus trichocarpa]
9 Hb_002876_190 0.1300291215 transcription factor TF Family: GRAS hypothetical protein PRUPE_ppa017519mg [Prunus persica]
10 Hb_006314_020 0.1309973715 - - PREDICTED: GABA transporter 1-like [Jatropha curcas]
11 Hb_000429_030 0.1319725675 - - Receptor protein kinase CLAVATA1 precursor, putative [Ricinus communis]
12 Hb_020805_110 0.1320250331 - - PREDICTED: glucan endo-1,3-beta-glucosidase 12 [Jatropha curcas]
13 Hb_001775_130 0.1325377597 - - Prephenate dehydratase [Hevea brasiliensis]
14 Hb_001856_150 0.1342198682 - - -
15 Hb_004241_050 0.1344763118 - - Indole-3-acetic acid-amido synthetase GH3.6, putative [Ricinus communis]
16 Hb_131029_010 0.1406168636 - - PREDICTED: protein TRANSPARENT TESTA 12-like [Jatropha curcas]
17 Hb_095532_010 0.1413066208 - - BnaC05g27570D [Brassica napus]
18 Hb_001821_030 0.1479725972 - - hypothetical protein JCGZ_13357 [Jatropha curcas]
19 Hb_161346_010 0.1493167247 - - PREDICTED: germin-like protein subfamily 1 member 20 [Populus euphratica]
20 Hb_002413_030 0.1494735634 - - sulfate transporter, putative [Ricinus communis]

Gene co-expression network

sample Hb_000098_210 Hb_000098_210 Hb_000032_330 Hb_000032_330 Hb_000098_210--Hb_000032_330 Hb_004875_040 Hb_004875_040 Hb_000098_210--Hb_004875_040 Hb_041063_010 Hb_041063_010 Hb_000098_210--Hb_041063_010 Hb_148817_010 Hb_148817_010 Hb_000098_210--Hb_148817_010 Hb_003171_070 Hb_003171_070 Hb_000098_210--Hb_003171_070 Hb_003371_040 Hb_003371_040 Hb_000098_210--Hb_003371_040 Hb_000032_330--Hb_041063_010 Hb_000032_330--Hb_148817_010 Hb_095532_010 Hb_095532_010 Hb_000032_330--Hb_095532_010 Hb_000032_330--Hb_004875_040 Hb_020805_110 Hb_020805_110 Hb_000032_330--Hb_020805_110 Hb_004875_040--Hb_020805_110 Hb_004875_040--Hb_148817_010 Hb_001856_150 Hb_001856_150 Hb_004875_040--Hb_001856_150 Hb_000676_380 Hb_000676_380 Hb_004875_040--Hb_000676_380 Hb_006314_020 Hb_006314_020 Hb_004875_040--Hb_006314_020 Hb_060236_010 Hb_060236_010 Hb_041063_010--Hb_060236_010 Hb_004241_050 Hb_004241_050 Hb_041063_010--Hb_004241_050 Hb_002054_090 Hb_002054_090 Hb_041063_010--Hb_002054_090 Hb_131417_010 Hb_131417_010 Hb_041063_010--Hb_131417_010 Hb_148817_010--Hb_095532_010 Hb_000521_350 Hb_000521_350 Hb_148817_010--Hb_000521_350 Hb_000081_030 Hb_000081_030 Hb_148817_010--Hb_000081_030 Hb_148817_010--Hb_006314_020 Hb_003171_070--Hb_000676_380 Hb_003171_070--Hb_006314_020 Hb_003171_070--Hb_001856_150 Hb_003171_070--Hb_003371_040 Hb_161346_010 Hb_161346_010 Hb_003171_070--Hb_161346_010 Hb_000429_030 Hb_000429_030 Hb_003171_070--Hb_000429_030 Hb_003371_040--Hb_006314_020 Hb_002876_190 Hb_002876_190 Hb_003371_040--Hb_002876_190 Hb_001775_130 Hb_001775_130 Hb_003371_040--Hb_001775_130 Hb_003371_040--Hb_000429_030 Hb_003371_040--Hb_001856_150
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.526726 0.0943992 4.28193 0.0499758 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 2.6618 0.0661092

CAGE analysis