Hb_004330_050

Information

Type -
Description -
Location Contig4330: 69599-70849
Sequence    

Annotation

kegg
ID rcu:RCOM_0903570
description hypothetical protein
nr
ID XP_002518429.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9RXG0
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0903570 PE=4 SV=1
Gene Ontology
ID GO:0009534
description chaperonin-like protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004330_050 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_010308_010 0.0057219127 - - hypothetical protein JCGZ_22818 [Jatropha curcas]
3 Hb_000496_080 0.0063438843 - - Proteinase inhibitor, putative [Ricinus communis]
4 Hb_020112_010 0.0216273909 - - acyltransferase, putative [Ricinus communis]
5 Hb_001300_060 0.0374911395 - - PREDICTED: monothiol glutaredoxin-S6-like [Jatropha curcas]
6 Hb_000329_570 0.0595438924 - - -
7 Hb_000743_070 0.0740013913 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_21060 [Jatropha curcas]
8 Hb_006103_050 0.0839772249 - - -
9 Hb_001404_060 0.0908622286 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
10 Hb_006275_040 0.0911795511 - - PREDICTED: V-type proton ATPase subunit a3-like [Jatropha curcas]
11 Hb_004785_150 0.0968067397 - - hypothetical protein JCGZ_25207 [Jatropha curcas]
12 Hb_005551_070 0.1012373823 - - PREDICTED: uncharacterized protein LOC105635822 isoform X1 [Jatropha curcas]
13 Hb_000127_050 0.1023731488 - - -
14 Hb_073870_010 0.1034551743 - - hypothetical protein RCOM_0725510 [Ricinus communis]
15 Hb_005305_170 0.1213664518 - - PREDICTED: probable beta-1,3-galactosyltransferase 8 [Jatropha curcas]
16 Hb_000046_550 0.1229759689 - - PREDICTED: protein ALWAYS EARLY 3 isoform X2 [Jatropha curcas]
17 Hb_001863_520 0.1291252148 - - conserved hypothetical protein [Ricinus communis]
18 Hb_005144_140 0.1378827291 - - conserved hypothetical protein [Ricinus communis]
19 Hb_023714_010 0.1440582185 - - hypothetical protein B456_007G377100 [Gossypium raimondii]
20 Hb_003858_050 0.1487591498 - - hypothetical protein PRUPE_ppa021882mg [Prunus persica]

Gene co-expression network

sample Hb_004330_050 Hb_004330_050 Hb_010308_010 Hb_010308_010 Hb_004330_050--Hb_010308_010 Hb_000496_080 Hb_000496_080 Hb_004330_050--Hb_000496_080 Hb_020112_010 Hb_020112_010 Hb_004330_050--Hb_020112_010 Hb_001300_060 Hb_001300_060 Hb_004330_050--Hb_001300_060 Hb_000329_570 Hb_000329_570 Hb_004330_050--Hb_000329_570 Hb_000743_070 Hb_000743_070 Hb_004330_050--Hb_000743_070 Hb_010308_010--Hb_000496_080 Hb_010308_010--Hb_020112_010 Hb_010308_010--Hb_001300_060 Hb_010308_010--Hb_000329_570 Hb_010308_010--Hb_000743_070 Hb_000496_080--Hb_020112_010 Hb_000496_080--Hb_001300_060 Hb_000496_080--Hb_000329_570 Hb_000496_080--Hb_000743_070 Hb_020112_010--Hb_001300_060 Hb_020112_010--Hb_000329_570 Hb_020112_010--Hb_000743_070 Hb_001300_060--Hb_000329_570 Hb_006275_040 Hb_006275_040 Hb_001300_060--Hb_006275_040 Hb_004785_150 Hb_004785_150 Hb_000329_570--Hb_004785_150 Hb_000127_050 Hb_000127_050 Hb_000743_070--Hb_000127_050 Hb_000743_070--Hb_004785_150
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0451341 0.199951 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0838838 0

CAGE analysis