Hb_000329_570

Information

Type -
Description -
Location Contig329: 446979-447762
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000329_570 0.0 - - -
2 Hb_001300_060 0.03995332 - - PREDICTED: monothiol glutaredoxin-S6-like [Jatropha curcas]
3 Hb_020112_010 0.0512681437 - - acyltransferase, putative [Ricinus communis]
4 Hb_000496_080 0.0534028346 - - Proteinase inhibitor, putative [Ricinus communis]
5 Hb_010308_010 0.0538475263 - - hypothetical protein JCGZ_22818 [Jatropha curcas]
6 Hb_004785_150 0.0556478477 - - hypothetical protein JCGZ_25207 [Jatropha curcas]
7 Hb_004330_050 0.0595438924 - - conserved hypothetical protein [Ricinus communis]
8 Hb_000743_070 0.0799444884 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_21060 [Jatropha curcas]
9 Hb_006275_040 0.0967211351 - - PREDICTED: V-type proton ATPase subunit a3-like [Jatropha curcas]
10 Hb_023714_010 0.106514055 - - hypothetical protein B456_007G377100 [Gossypium raimondii]
11 Hb_000127_050 0.1264463046 - - -
12 Hb_001863_520 0.1329786933 - - conserved hypothetical protein [Ricinus communis]
13 Hb_003057_040 0.1346796753 - - PREDICTED: salt stress-induced hydrophobic peptide ESI3 [Vitis vinifera]
14 Hb_006103_050 0.1429757171 - - -
15 Hb_003177_100 0.1463611197 - - PREDICTED: auxin-induced protein 6B [Jatropha curcas]
16 Hb_001404_060 0.147334106 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
17 Hb_081191_010 0.1506044383 - - PREDICTED: pathogenesis-related protein PR-1-like [Jatropha curcas]
18 Hb_005551_070 0.154452741 - - PREDICTED: uncharacterized protein LOC105635822 isoform X1 [Jatropha curcas]
19 Hb_073870_010 0.1565389331 - - hypothetical protein RCOM_0725510 [Ricinus communis]
20 Hb_160814_010 0.1587741386 - - PREDICTED: probable sulfate transporter 3.5 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_000329_570 Hb_000329_570 Hb_001300_060 Hb_001300_060 Hb_000329_570--Hb_001300_060 Hb_020112_010 Hb_020112_010 Hb_000329_570--Hb_020112_010 Hb_000496_080 Hb_000496_080 Hb_000329_570--Hb_000496_080 Hb_010308_010 Hb_010308_010 Hb_000329_570--Hb_010308_010 Hb_004785_150 Hb_004785_150 Hb_000329_570--Hb_004785_150 Hb_004330_050 Hb_004330_050 Hb_000329_570--Hb_004330_050 Hb_001300_060--Hb_010308_010 Hb_001300_060--Hb_000496_080 Hb_001300_060--Hb_004330_050 Hb_001300_060--Hb_020112_010 Hb_006275_040 Hb_006275_040 Hb_001300_060--Hb_006275_040 Hb_020112_010--Hb_000496_080 Hb_020112_010--Hb_010308_010 Hb_020112_010--Hb_004330_050 Hb_000743_070 Hb_000743_070 Hb_020112_010--Hb_000743_070 Hb_000496_080--Hb_010308_010 Hb_000496_080--Hb_004330_050 Hb_000496_080--Hb_000743_070 Hb_010308_010--Hb_004330_050 Hb_010308_010--Hb_000743_070 Hb_004785_150--Hb_000743_070 Hb_004785_150--Hb_020112_010 Hb_004785_150--Hb_000496_080 Hb_004785_150--Hb_010308_010 Hb_004785_150--Hb_001300_060 Hb_004330_050--Hb_000743_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.075013 0.425692 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.22216 0

CAGE analysis