Hb_039946_040

Information

Type -
Description -
Location Contig39946: 23658-25584
Sequence    

Annotation

kegg
ID rcu:RCOM_2121370
description sugar transporter, putative (EC:1.3.1.74)
nr
ID XP_012077517.1
description PREDICTED: sugar transport protein 14-like [Jatropha curcas]
swissprot
ID Q8GW61
description Sugar transport protein 14 OS=Arabidopsis thaliana GN=STP14 PE=2 SV=2
trembl
ID A0A067KC05
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07292 PE=3 SV=1
Gene Ontology
ID GO:0005886
description sugar transport protein 14-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_39790: 23718-24444 , PASA_asmbl_39791: 24456-24784 , PASA_asmbl_39792: 24796-25486
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_039946_040 0.0 - - PREDICTED: sugar transport protein 14-like [Jatropha curcas]
2 Hb_006351_040 0.1005306587 - - conserved hypothetical protein [Ricinus communis]
3 Hb_059226_020 0.1088192719 - - hypothetical protein B456_008G287700 [Gossypium raimondii]
4 Hb_001091_040 0.109056025 - - hypothetical protein JCGZ_01204 [Jatropha curcas]
5 Hb_004319_100 0.1119097214 - - PREDICTED: gibberellin-regulated protein 14 isoform X3 [Jatropha curcas]
6 Hb_004926_010 0.1124979554 - - hypothetical protein JCGZ_27059 [Jatropha curcas]
7 Hb_000194_030 0.1212737447 transcription factor TF Family: NAC NAC transcription factor 059 [Jatropha curcas]
8 Hb_159012_010 0.1245730614 - - PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At5g06940 [Jatropha curcas]
9 Hb_030088_010 0.1268199217 - - basic blue copper family protein [Populus trichocarpa]
10 Hb_004330_060 0.1336740312 - - hypothetical protein POPTR_0011s01530g [Populus trichocarpa]
11 Hb_000139_460 0.1379948573 - - basic 7S globulin 2 precursor small subunit, putative [Ricinus communis]
12 Hb_000917_070 0.138359594 - - conserved hypothetical protein [Ricinus communis]
13 Hb_004102_150 0.1385154776 - - Late embryogenesis abundant protein D-7, putative [Ricinus communis]
14 Hb_000480_050 0.1404335196 - - hypothetical protein PHAVU_004G154200g [Phaseolus vulgaris]
15 Hb_005144_140 0.1420625999 - - conserved hypothetical protein [Ricinus communis]
16 Hb_000935_060 0.1421977386 - - PREDICTED: 1-aminocyclopropane-1-carboxylate synthase 8-like [Jatropha curcas]
17 Hb_019299_020 0.1462220103 - - PREDICTED: putative kinase-like protein TMKL1 [Jatropha curcas]
18 Hb_005348_020 0.1473777696 - - conserved hypothetical protein [Ricinus communis]
19 Hb_000320_240 0.1478436855 - - multicopper oxidase, putative [Ricinus communis]
20 Hb_004031_060 0.1501218636 - - hypothetical protein B456_007G3219002, partial [Gossypium raimondii]

Gene co-expression network

sample Hb_039946_040 Hb_039946_040 Hb_006351_040 Hb_006351_040 Hb_039946_040--Hb_006351_040 Hb_059226_020 Hb_059226_020 Hb_039946_040--Hb_059226_020 Hb_001091_040 Hb_001091_040 Hb_039946_040--Hb_001091_040 Hb_004319_100 Hb_004319_100 Hb_039946_040--Hb_004319_100 Hb_004926_010 Hb_004926_010 Hb_039946_040--Hb_004926_010 Hb_000194_030 Hb_000194_030 Hb_039946_040--Hb_000194_030 Hb_006351_040--Hb_001091_040 Hb_000139_460 Hb_000139_460 Hb_006351_040--Hb_000139_460 Hb_000086_510 Hb_000086_510 Hb_006351_040--Hb_000086_510 Hb_019299_020 Hb_019299_020 Hb_006351_040--Hb_019299_020 Hb_004397_010 Hb_004397_010 Hb_006351_040--Hb_004397_010 Hb_059226_020--Hb_004397_010 Hb_082733_010 Hb_082733_010 Hb_059226_020--Hb_082733_010 Hb_066207_020 Hb_066207_020 Hb_059226_020--Hb_066207_020 Hb_030088_010 Hb_030088_010 Hb_059226_020--Hb_030088_010 Hb_004330_060 Hb_004330_060 Hb_059226_020--Hb_004330_060 Hb_001091_040--Hb_000139_460 Hb_001091_040--Hb_004926_010 Hb_004031_060 Hb_004031_060 Hb_001091_040--Hb_004031_060 Hb_002020_010 Hb_002020_010 Hb_001091_040--Hb_002020_010 Hb_004319_100--Hb_000194_030 Hb_033772_040 Hb_033772_040 Hb_004319_100--Hb_033772_040 Hb_007426_100 Hb_007426_100 Hb_004319_100--Hb_007426_100 Hb_001529_010 Hb_001529_010 Hb_004319_100--Hb_001529_010 Hb_034310_020 Hb_034310_020 Hb_004319_100--Hb_034310_020 Hb_159012_010 Hb_159012_010 Hb_004319_100--Hb_159012_010 Hb_004926_010--Hb_000194_030 Hb_004926_010--Hb_159012_010 Hb_000480_050 Hb_000480_050 Hb_004926_010--Hb_000480_050 Hb_004926_010--Hb_004031_060 Hb_002999_010 Hb_002999_010 Hb_004926_010--Hb_002999_010 Hb_004926_010--Hb_007426_100 Hb_000194_030--Hb_159012_010 Hb_000194_030--Hb_007426_100 Hb_000194_030--Hb_001529_010 Hb_000194_030--Hb_000480_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0936072 0.327932 1.29247 12.3782 0.026796 0.0234485
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 1.84545 0.10035

CAGE analysis