Hb_007426_100

Information

Type -
Description -
Location Contig7426: 104538-105305
Sequence    

Annotation

kegg
ID rcu:RCOM_0631470
description hypothetical protein
nr
ID XP_002519656.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9S0Y7
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0631470 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007426_100 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_002874_100 0.0671204813 - - cytochrome P450, putative [Ricinus communis]
3 Hb_033153_030 0.0692262299 - - PREDICTED: uncharacterized protein LOC105650145 [Jatropha curcas]
4 Hb_000194_030 0.0708124111 transcription factor TF Family: NAC NAC transcription factor 059 [Jatropha curcas]
5 Hb_000445_480 0.0778065789 - - cytochrome P450, putative [Ricinus communis]
6 Hb_001529_010 0.0824837141 - - -
7 Hb_002894_020 0.0900381847 - - PREDICTED: pentatricopeptide repeat-containing protein At3g12770-like [Jatropha curcas]
8 Hb_004319_100 0.094549291 - - PREDICTED: gibberellin-regulated protein 14 isoform X3 [Jatropha curcas]
9 Hb_003058_090 0.1018912144 - - hypothetical protein POPTR_0001s28080g [Populus trichocarpa]
10 Hb_000363_100 0.1049852876 - - -
11 Hb_000269_050 0.1055441772 - - PREDICTED: beta-glucosidase 12-like [Gossypium raimondii]
12 Hb_001104_290 0.1088087111 transcription factor TF Family: ERF Dehydration-responsive element-binding protein 1B, putative [Theobroma cacao]
13 Hb_004926_010 0.1106074472 - - hypothetical protein JCGZ_27059 [Jatropha curcas]
14 Hb_000381_140 0.1167743806 - - PREDICTED: S-type anion channel SLAH4-like [Jatropha curcas]
15 Hb_000224_050 0.117527753 - - conserved hypothetical protein [Ricinus communis]
16 Hb_007477_020 0.1189450661 - - PREDICTED: probable indole-3-pyruvate monooxygenase YUCCA5 [Jatropha curcas]
17 Hb_007292_020 0.1196888211 - - Indole-3-acetic acid-amido synthetase GH3.6, putative [Ricinus communis]
18 Hb_159012_010 0.1250372724 - - PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At5g06940 [Jatropha curcas]
19 Hb_000366_070 0.1271765787 - - PREDICTED: protein NRT1/ PTR FAMILY 6.2 [Jatropha curcas]
20 Hb_033772_040 0.1302181921 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_007426_100 Hb_007426_100 Hb_002874_100 Hb_002874_100 Hb_007426_100--Hb_002874_100 Hb_033153_030 Hb_033153_030 Hb_007426_100--Hb_033153_030 Hb_000194_030 Hb_000194_030 Hb_007426_100--Hb_000194_030 Hb_000445_480 Hb_000445_480 Hb_007426_100--Hb_000445_480 Hb_001529_010 Hb_001529_010 Hb_007426_100--Hb_001529_010 Hb_002894_020 Hb_002894_020 Hb_007426_100--Hb_002894_020 Hb_002874_100--Hb_033153_030 Hb_000363_100 Hb_000363_100 Hb_002874_100--Hb_000363_100 Hb_001104_290 Hb_001104_290 Hb_002874_100--Hb_001104_290 Hb_002874_100--Hb_000445_480 Hb_003252_030 Hb_003252_030 Hb_002874_100--Hb_003252_030 Hb_033153_030--Hb_000445_480 Hb_033153_030--Hb_001529_010 Hb_033153_030--Hb_002894_020 Hb_005373_030 Hb_005373_030 Hb_033153_030--Hb_005373_030 Hb_159012_010 Hb_159012_010 Hb_000194_030--Hb_159012_010 Hb_004926_010 Hb_004926_010 Hb_000194_030--Hb_004926_010 Hb_004319_100 Hb_004319_100 Hb_000194_030--Hb_004319_100 Hb_000194_030--Hb_001529_010 Hb_000480_050 Hb_000480_050 Hb_000194_030--Hb_000480_050 Hb_000445_480--Hb_002894_020 Hb_000445_480--Hb_001529_010 Hb_000445_480--Hb_000363_100 Hb_001529_010--Hb_004319_100 Hb_001529_010--Hb_002894_020 Hb_000224_020 Hb_000224_020 Hb_002894_020--Hb_000224_020 Hb_002894_020--Hb_002874_100 Hb_002894_020--Hb_000363_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0938795 0.116648 1.71353 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0908569 0

CAGE analysis