Hb_000363_100

Information

Type -
Description -
Location Contig363: 76819-79063
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_37271: 78035-82146 , PASA_asmbl_37273: 78071-78340 , PASA_asmbl_37274: 78352-78847
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000363_100 0.0 - - -
2 Hb_001104_290 0.0054877366 transcription factor TF Family: ERF Dehydration-responsive element-binding protein 1B, putative [Theobroma cacao]
3 Hb_002874_100 0.0674294752 - - cytochrome P450, putative [Ricinus communis]
4 Hb_003252_030 0.0798235328 - - Auxin-induced protein 5NG4, putative [Ricinus communis]
5 Hb_011689_090 0.0826251172 - - PREDICTED: uncharacterized protein LOC105631865 [Jatropha curcas]
6 Hb_000445_480 0.0869105796 - - cytochrome P450, putative [Ricinus communis]
7 Hb_116679_010 0.0878903473 - - PREDICTED: transcription factor bHLH110 isoform X2 [Vitis vinifera]
8 Hb_003747_080 0.0883994291 - - chloroplast-targeted copper chaperone, putative [Ricinus communis]
9 Hb_033153_030 0.0887715042 - - PREDICTED: uncharacterized protein LOC105650145 [Jatropha curcas]
10 Hb_000203_110 0.0905977399 - - -
11 Hb_181191_010 0.09078825 - - kinase, putative [Ricinus communis]
12 Hb_000027_010 0.0944958341 - - -
13 Hb_002894_020 0.100780924 - - PREDICTED: pentatricopeptide repeat-containing protein At3g12770-like [Jatropha curcas]
14 Hb_008727_090 0.1012552772 - - PREDICTED: 17.3 kDa class I heat shock protein-like [Jatropha curcas]
15 Hb_000203_120 0.1022354723 - - conserved hypothetical protein [Ricinus communis]
16 Hb_007426_100 0.1049852876 - - conserved hypothetical protein [Ricinus communis]
17 Hb_006275_080 0.1074776039 - - PREDICTED: protein WALLS ARE THIN 1 [Jatropha curcas]
18 Hb_000381_140 0.1089602702 - - PREDICTED: S-type anion channel SLAH4-like [Jatropha curcas]
19 Hb_137821_010 0.1092217021 - - hypothetical protein CISIN_1g034189mg [Citrus sinensis]
20 Hb_007472_060 0.109532742 - - PREDICTED: ABC transporter G family member 14-like isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_000363_100 Hb_000363_100 Hb_001104_290 Hb_001104_290 Hb_000363_100--Hb_001104_290 Hb_002874_100 Hb_002874_100 Hb_000363_100--Hb_002874_100 Hb_003252_030 Hb_003252_030 Hb_000363_100--Hb_003252_030 Hb_011689_090 Hb_011689_090 Hb_000363_100--Hb_011689_090 Hb_000445_480 Hb_000445_480 Hb_000363_100--Hb_000445_480 Hb_116679_010 Hb_116679_010 Hb_000363_100--Hb_116679_010 Hb_001104_290--Hb_002874_100 Hb_001104_290--Hb_003252_030 Hb_001104_290--Hb_011689_090 Hb_003747_080 Hb_003747_080 Hb_001104_290--Hb_003747_080 Hb_001104_290--Hb_116679_010 Hb_033153_030 Hb_033153_030 Hb_002874_100--Hb_033153_030 Hb_007426_100 Hb_007426_100 Hb_002874_100--Hb_007426_100 Hb_002874_100--Hb_000445_480 Hb_002874_100--Hb_003252_030 Hb_003252_030--Hb_011689_090 Hb_003252_030--Hb_003747_080 Hb_000203_110 Hb_000203_110 Hb_003252_030--Hb_000203_110 Hb_011689_090--Hb_116679_010 Hb_006275_080 Hb_006275_080 Hb_011689_090--Hb_006275_080 Hb_170597_010 Hb_170597_010 Hb_011689_090--Hb_170597_010 Hb_006452_080 Hb_006452_080 Hb_011689_090--Hb_006452_080 Hb_003607_040 Hb_003607_040 Hb_011689_090--Hb_003607_040 Hb_000027_010 Hb_000027_010 Hb_011689_090--Hb_000027_010 Hb_000445_480--Hb_033153_030 Hb_002894_020 Hb_002894_020 Hb_000445_480--Hb_002894_020 Hb_001529_010 Hb_001529_010 Hb_000445_480--Hb_001529_010 Hb_000445_480--Hb_007426_100 Hb_116679_010--Hb_170597_010 Hb_116679_010--Hb_006275_080 Hb_116679_010--Hb_003607_040 Hb_116679_010--Hb_006452_080 Hb_116679_010--Hb_000027_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 4.35625 1.93268 61.6031 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 1.00502 0

CAGE analysis