Hb_000203_110

Information

Type -
Description -
Location Contig203: 168938-169156
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000203_110 0.0 - - -
2 Hb_181191_010 0.0326356926 - - kinase, putative [Ricinus communis]
3 Hb_003747_080 0.0374332178 - - chloroplast-targeted copper chaperone, putative [Ricinus communis]
4 Hb_000203_120 0.0514505063 - - conserved hypothetical protein [Ricinus communis]
5 Hb_008727_090 0.0528576671 - - PREDICTED: 17.3 kDa class I heat shock protein-like [Jatropha curcas]
6 Hb_120496_010 0.0578205656 - - PREDICTED: CSC1-like protein At1g32090 [Cicer arietinum]
7 Hb_137821_010 0.0865432357 - - hypothetical protein CISIN_1g034189mg [Citrus sinensis]
8 Hb_001104_290 0.0893730599 transcription factor TF Family: ERF Dehydration-responsive element-binding protein 1B, putative [Theobroma cacao]
9 Hb_000363_100 0.0905977399 - - -
10 Hb_011689_090 0.0933185892 - - PREDICTED: uncharacterized protein LOC105631865 [Jatropha curcas]
11 Hb_006275_080 0.0975206046 - - PREDICTED: protein WALLS ARE THIN 1 [Jatropha curcas]
12 Hb_000527_090 0.0998855552 - - serine carboxypeptidase, putative [Ricinus communis]
13 Hb_000381_140 0.1027690267 - - PREDICTED: S-type anion channel SLAH4-like [Jatropha curcas]
14 Hb_003252_030 0.1030644031 - - Auxin-induced protein 5NG4, putative [Ricinus communis]
15 Hb_005463_120 0.1034317457 - - gibberellin 20-oxidase, putative [Ricinus communis]
16 Hb_006452_080 0.1054407194 - - Nodulin, putative [Ricinus communis]
17 Hb_116679_010 0.106324025 - - PREDICTED: transcription factor bHLH110 isoform X2 [Vitis vinifera]
18 Hb_170597_010 0.1068582304 - - hypothetical protein POPTR_0014s17480g [Populus trichocarpa]
19 Hb_007441_320 0.1084352478 - - PREDICTED: putative invertase inhibitor [Jatropha curcas]
20 Hb_018671_010 0.1084919994 - - -

Gene co-expression network

sample Hb_000203_110 Hb_000203_110 Hb_181191_010 Hb_181191_010 Hb_000203_110--Hb_181191_010 Hb_003747_080 Hb_003747_080 Hb_000203_110--Hb_003747_080 Hb_000203_120 Hb_000203_120 Hb_000203_110--Hb_000203_120 Hb_008727_090 Hb_008727_090 Hb_000203_110--Hb_008727_090 Hb_120496_010 Hb_120496_010 Hb_000203_110--Hb_120496_010 Hb_137821_010 Hb_137821_010 Hb_000203_110--Hb_137821_010 Hb_181191_010--Hb_008727_090 Hb_181191_010--Hb_000203_120 Hb_181191_010--Hb_003747_080 Hb_181191_010--Hb_120496_010 Hb_000363_100 Hb_000363_100 Hb_181191_010--Hb_000363_100 Hb_003747_080--Hb_137821_010 Hb_003747_080--Hb_120496_010 Hb_000527_090 Hb_000527_090 Hb_003747_080--Hb_000527_090 Hb_003747_080--Hb_008727_090 Hb_000203_120--Hb_008727_090 Hb_000203_120--Hb_003747_080 Hb_000917_220 Hb_000917_220 Hb_000203_120--Hb_000917_220 Hb_018671_010 Hb_018671_010 Hb_000203_120--Hb_018671_010 Hb_008727_090--Hb_000917_220 Hb_008727_090--Hb_018671_010 Hb_001277_390 Hb_001277_390 Hb_120496_010--Hb_001277_390 Hb_118941_010 Hb_118941_010 Hb_120496_010--Hb_118941_010 Hb_000224_070 Hb_000224_070 Hb_120496_010--Hb_000224_070 Hb_007441_320 Hb_007441_320 Hb_120496_010--Hb_007441_320 Hb_005463_120 Hb_005463_120 Hb_137821_010--Hb_005463_120 Hb_137821_010--Hb_000527_090 Hb_000048_120 Hb_000048_120 Hb_137821_010--Hb_000048_120 Hb_125152_010 Hb_125152_010 Hb_137821_010--Hb_125152_010 Hb_000629_140 Hb_000629_140 Hb_137821_010--Hb_000629_140
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.792834 0.55635 14.4177 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis