Hb_000203_120

Information

Type -
Description -
Location Contig203: 172962-173279
Sequence    

Annotation

kegg
ID rcu:RCOM_0607800
description hypothetical protein
nr
ID XP_002521949.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9S7I0
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0607800 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000203_120 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_008727_090 0.005943904 - - PREDICTED: 17.3 kDa class I heat shock protein-like [Jatropha curcas]
3 Hb_181191_010 0.0259687537 - - kinase, putative [Ricinus communis]
4 Hb_000203_110 0.0514505063 - - -
5 Hb_003747_080 0.0764826711 - - chloroplast-targeted copper chaperone, putative [Ricinus communis]
6 Hb_000917_220 0.0814239613 - - clavata3/esr-related 12 family protein [Populus trichocarpa]
7 Hb_018671_010 0.0896790853 - - -
8 Hb_002186_120 0.0929302808 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g53440 isoform X5 [Populus euphratica]
9 Hb_003540_010 0.0966250913 - - -
10 Hb_000363_100 0.1022354723 - - -
11 Hb_001104_290 0.1035777453 transcription factor TF Family: ERF Dehydration-responsive element-binding protein 1B, putative [Theobroma cacao]
12 Hb_000224_050 0.10487876 - - conserved hypothetical protein [Ricinus communis]
13 Hb_120496_010 0.1066437928 - - PREDICTED: CSC1-like protein At1g32090 [Cicer arietinum]
14 Hb_006275_080 0.1100483127 - - PREDICTED: protein WALLS ARE THIN 1 [Jatropha curcas]
15 Hb_015085_010 0.1102206724 - - hypothetical protein POPTR_0018s11360g [Populus trichocarpa]
16 Hb_006052_080 0.1104701205 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH140-like [Populus euphratica]
17 Hb_011689_090 0.1129890907 - - PREDICTED: uncharacterized protein LOC105631865 [Jatropha curcas]
18 Hb_170597_010 0.1150680878 - - hypothetical protein POPTR_0014s17480g [Populus trichocarpa]
19 Hb_000027_010 0.115164575 - - -
20 Hb_178968_010 0.1167599152 - - hypothetical protein JCGZ_15830 [Jatropha curcas]

Gene co-expression network

sample Hb_000203_120 Hb_000203_120 Hb_008727_090 Hb_008727_090 Hb_000203_120--Hb_008727_090 Hb_181191_010 Hb_181191_010 Hb_000203_120--Hb_181191_010 Hb_000203_110 Hb_000203_110 Hb_000203_120--Hb_000203_110 Hb_003747_080 Hb_003747_080 Hb_000203_120--Hb_003747_080 Hb_000917_220 Hb_000917_220 Hb_000203_120--Hb_000917_220 Hb_018671_010 Hb_018671_010 Hb_000203_120--Hb_018671_010 Hb_008727_090--Hb_181191_010 Hb_008727_090--Hb_000203_110 Hb_008727_090--Hb_003747_080 Hb_008727_090--Hb_000917_220 Hb_008727_090--Hb_018671_010 Hb_181191_010--Hb_000203_110 Hb_181191_010--Hb_003747_080 Hb_120496_010 Hb_120496_010 Hb_181191_010--Hb_120496_010 Hb_000363_100 Hb_000363_100 Hb_181191_010--Hb_000363_100 Hb_000203_110--Hb_003747_080 Hb_000203_110--Hb_120496_010 Hb_137821_010 Hb_137821_010 Hb_000203_110--Hb_137821_010 Hb_003747_080--Hb_137821_010 Hb_003747_080--Hb_120496_010 Hb_000527_090 Hb_000527_090 Hb_003747_080--Hb_000527_090 Hb_003540_010 Hb_003540_010 Hb_000917_220--Hb_003540_010 Hb_174829_030 Hb_174829_030 Hb_000917_220--Hb_174829_030 Hb_003216_010 Hb_003216_010 Hb_000917_220--Hb_003216_010 Hb_178968_010 Hb_178968_010 Hb_000917_220--Hb_178968_010 Hb_151027_010 Hb_151027_010 Hb_000917_220--Hb_151027_010 Hb_004137_090 Hb_004137_090 Hb_000917_220--Hb_004137_090 Hb_002186_120 Hb_002186_120 Hb_018671_010--Hb_002186_120 Hb_000277_040 Hb_000277_040 Hb_018671_010--Hb_000277_040 Hb_018671_010--Hb_178968_010 Hb_000053_150 Hb_000053_150 Hb_018671_010--Hb_000053_150 Hb_018671_010--Hb_003540_010 Hb_000224_050 Hb_000224_050 Hb_018671_010--Hb_000224_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.15261 0.122226 1.98008 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis