Hb_008727_090

Information

Type -
Description -
Location Contig8727: 59437-59949
Sequence    

Annotation

kegg
ID rcu:RCOM_0731690
description heat-shock protein, putative
nr
ID XP_012068597.1
description PREDICTED: 17.3 kDa class I heat shock protein-like [Jatropha curcas]
swissprot
ID P02519
description 17.3 kDa class I heat shock protein OS=Glycine max GN=HSP17.3-B PE=3 SV=1
trembl
ID A0A067L124
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02891 PE=3 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_008727_090 0.0 - - PREDICTED: 17.3 kDa class I heat shock protein-like [Jatropha curcas]
2 Hb_000203_120 0.005943904 - - conserved hypothetical protein [Ricinus communis]
3 Hb_181191_010 0.0243982082 - - kinase, putative [Ricinus communis]
4 Hb_000203_110 0.0528576671 - - -
5 Hb_003747_080 0.0752625303 - - chloroplast-targeted copper chaperone, putative [Ricinus communis]
6 Hb_000917_220 0.0830382189 - - clavata3/esr-related 12 family protein [Populus trichocarpa]
7 Hb_018671_010 0.0952654898 - - -
8 Hb_002186_120 0.0985877476 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g53440 isoform X5 [Populus euphratica]
9 Hb_003540_010 0.099511204 - - -
10 Hb_000363_100 0.1012552772 - - -
11 Hb_001104_290 0.1025936661 transcription factor TF Family: ERF Dehydration-responsive element-binding protein 1B, putative [Theobroma cacao]
12 Hb_015085_010 0.1057192114 - - hypothetical protein POPTR_0018s11360g [Populus trichocarpa]
13 Hb_000224_050 0.1087006239 - - conserved hypothetical protein [Ricinus communis]
14 Hb_006052_080 0.1088031645 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH140-like [Populus euphratica]
15 Hb_120496_010 0.1089783521 - - PREDICTED: CSC1-like protein At1g32090 [Cicer arietinum]
16 Hb_006275_080 0.1094845505 - - PREDICTED: protein WALLS ARE THIN 1 [Jatropha curcas]
17 Hb_011689_090 0.1124357137 - - PREDICTED: uncharacterized protein LOC105631865 [Jatropha curcas]
18 Hb_000027_010 0.1130310582 - - -
19 Hb_170597_010 0.1151671663 - - hypothetical protein POPTR_0014s17480g [Populus trichocarpa]
20 Hb_137821_010 0.1163276257 - - hypothetical protein CISIN_1g034189mg [Citrus sinensis]

Gene co-expression network

sample Hb_008727_090 Hb_008727_090 Hb_000203_120 Hb_000203_120 Hb_008727_090--Hb_000203_120 Hb_181191_010 Hb_181191_010 Hb_008727_090--Hb_181191_010 Hb_000203_110 Hb_000203_110 Hb_008727_090--Hb_000203_110 Hb_003747_080 Hb_003747_080 Hb_008727_090--Hb_003747_080 Hb_000917_220 Hb_000917_220 Hb_008727_090--Hb_000917_220 Hb_018671_010 Hb_018671_010 Hb_008727_090--Hb_018671_010 Hb_000203_120--Hb_181191_010 Hb_000203_120--Hb_000203_110 Hb_000203_120--Hb_003747_080 Hb_000203_120--Hb_000917_220 Hb_000203_120--Hb_018671_010 Hb_181191_010--Hb_000203_110 Hb_181191_010--Hb_003747_080 Hb_120496_010 Hb_120496_010 Hb_181191_010--Hb_120496_010 Hb_000363_100 Hb_000363_100 Hb_181191_010--Hb_000363_100 Hb_000203_110--Hb_003747_080 Hb_000203_110--Hb_120496_010 Hb_137821_010 Hb_137821_010 Hb_000203_110--Hb_137821_010 Hb_003747_080--Hb_137821_010 Hb_003747_080--Hb_120496_010 Hb_000527_090 Hb_000527_090 Hb_003747_080--Hb_000527_090 Hb_003540_010 Hb_003540_010 Hb_000917_220--Hb_003540_010 Hb_174829_030 Hb_174829_030 Hb_000917_220--Hb_174829_030 Hb_003216_010 Hb_003216_010 Hb_000917_220--Hb_003216_010 Hb_178968_010 Hb_178968_010 Hb_000917_220--Hb_178968_010 Hb_151027_010 Hb_151027_010 Hb_000917_220--Hb_151027_010 Hb_004137_090 Hb_004137_090 Hb_000917_220--Hb_004137_090 Hb_002186_120 Hb_002186_120 Hb_018671_010--Hb_002186_120 Hb_000277_040 Hb_000277_040 Hb_018671_010--Hb_000277_040 Hb_018671_010--Hb_178968_010 Hb_000053_150 Hb_000053_150 Hb_018671_010--Hb_000053_150 Hb_018671_010--Hb_003540_010 Hb_000224_050 Hb_000224_050 Hb_018671_010--Hb_000224_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0569521 0.0422871 0.704585 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis