Hb_033772_040

Information

Type -
Description -
Location Contig33772: 79042-79383
Sequence    

Annotation

kegg
ID rcu:RCOM_1591930
description hypothetical protein
nr
ID XP_002510275.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9R7I2
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1591930 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_033772_040 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_034310_020 0.0507275468 - - PREDICTED: proline-rich receptor-like protein kinase PERK3 [Jatropha curcas]
3 Hb_004319_100 0.0791452836 - - PREDICTED: gibberellin-regulated protein 14 isoform X3 [Jatropha curcas]
4 Hb_004474_020 0.1085775221 - - aldo-keto reductase, putative [Ricinus communis]
5 Hb_001529_010 0.1221816035 - - -
6 Hb_010926_020 0.1223244957 - - PREDICTED: zinc-metallopeptidase, peroxisomal-like [Camelina sativa]
7 Hb_004899_380 0.1236174311 - - conserved hypothetical protein [Ricinus communis]
8 Hb_107495_060 0.1254217614 - - Cell division protein kinase, putative [Ricinus communis]
9 Hb_000224_020 0.1286166201 - - PREDICTED: uncharacterized protein LOC105640888 [Jatropha curcas]
10 Hb_007426_100 0.1302181921 - - conserved hypothetical protein [Ricinus communis]
11 Hb_072670_010 0.1304455013 - - Calcium-activated outward-rectifying potassium channel, putative [Ricinus communis]
12 Hb_002894_020 0.130516653 - - PREDICTED: pentatricopeptide repeat-containing protein At3g12770-like [Jatropha curcas]
13 Hb_048987_020 0.1311624676 - - hypothetical protein JCGZ_27055 [Jatropha curcas]
14 Hb_008406_050 0.1322536767 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 2 [Jatropha curcas]
15 Hb_005736_010 0.1347222356 - - PREDICTED: bidirectional sugar transporter SWEET1 isoform X2 [Jatropha curcas]
16 Hb_000194_030 0.1363090694 transcription factor TF Family: NAC NAC transcription factor 059 [Jatropha curcas]
17 Hb_180695_010 0.1419957594 - - hypothetical protein CICLE_v10013449mg [Citrus clementina]
18 Hb_008066_020 0.1464538107 - - conserved hypothetical protein [Ricinus communis]
19 Hb_000740_080 0.1489619378 - - -
20 Hb_000445_480 0.1497913912 - - cytochrome P450, putative [Ricinus communis]

Gene co-expression network

sample Hb_033772_040 Hb_033772_040 Hb_034310_020 Hb_034310_020 Hb_033772_040--Hb_034310_020 Hb_004319_100 Hb_004319_100 Hb_033772_040--Hb_004319_100 Hb_004474_020 Hb_004474_020 Hb_033772_040--Hb_004474_020 Hb_001529_010 Hb_001529_010 Hb_033772_040--Hb_001529_010 Hb_010926_020 Hb_010926_020 Hb_033772_040--Hb_010926_020 Hb_004899_380 Hb_004899_380 Hb_033772_040--Hb_004899_380 Hb_034310_020--Hb_004474_020 Hb_034310_020--Hb_004899_380 Hb_034310_020--Hb_004319_100 Hb_008406_050 Hb_008406_050 Hb_034310_020--Hb_008406_050 Hb_048987_020 Hb_048987_020 Hb_034310_020--Hb_048987_020 Hb_000194_030 Hb_000194_030 Hb_004319_100--Hb_000194_030 Hb_007426_100 Hb_007426_100 Hb_004319_100--Hb_007426_100 Hb_004319_100--Hb_001529_010 Hb_159012_010 Hb_159012_010 Hb_004319_100--Hb_159012_010 Hb_004474_020--Hb_004899_380 Hb_000224_020 Hb_000224_020 Hb_004474_020--Hb_000224_020 Hb_004474_020--Hb_048987_020 Hb_003777_150 Hb_003777_150 Hb_004474_020--Hb_003777_150 Hb_004474_020--Hb_008406_050 Hb_033153_030 Hb_033153_030 Hb_001529_010--Hb_033153_030 Hb_000445_480 Hb_000445_480 Hb_001529_010--Hb_000445_480 Hb_001529_010--Hb_000194_030 Hb_001529_010--Hb_007426_100 Hb_002894_020 Hb_002894_020 Hb_001529_010--Hb_002894_020 Hb_057018_010 Hb_057018_010 Hb_010926_020--Hb_057018_010 Hb_072670_010 Hb_072670_010 Hb_010926_020--Hb_072670_010 Hb_005736_010 Hb_005736_010 Hb_010926_020--Hb_005736_010 Hb_002511_050 Hb_002511_050 Hb_010926_020--Hb_002511_050 Hb_010926_020--Hb_002894_020 Hb_010926_020--Hb_000224_020 Hb_004899_380--Hb_048987_020 Hb_004899_380--Hb_000224_020 Hb_001006_080 Hb_001006_080 Hb_004899_380--Hb_001006_080 Hb_000696_120 Hb_000696_120 Hb_004899_380--Hb_000696_120
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.103857 0.185796 1.04998 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0966184 0

CAGE analysis