Hb_006351_040

Information

Type -
Description -
Location Contig6351: 79201-79993
Sequence    

Annotation

kegg
ID rcu:RCOM_0498030
description hypothetical protein
nr
ID XP_002530401.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9SWN2
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0498030 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006351_040 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_001091_040 0.0859945589 - - hypothetical protein JCGZ_01204 [Jatropha curcas]
3 Hb_039946_040 0.1005306587 - - PREDICTED: sugar transport protein 14-like [Jatropha curcas]
4 Hb_000139_460 0.1146843056 - - basic 7S globulin 2 precursor small subunit, putative [Ricinus communis]
5 Hb_000086_510 0.121613167 - - Acid phosphatase 1 precursor, putative [Ricinus communis]
6 Hb_019299_020 0.121972883 - - PREDICTED: putative kinase-like protein TMKL1 [Jatropha curcas]
7 Hb_004397_010 0.1248302829 - - Receptor protein kinase CLAVATA1 precursor, putative [Ricinus communis]
8 Hb_002304_110 0.1364621678 - - hypothetical protein MIMGU_mgv1a023246mg [Erythranthe guttata]
9 Hb_000320_240 0.1381201673 - - multicopper oxidase, putative [Ricinus communis]
10 Hb_000352_360 0.1387435489 - - PREDICTED: 4-coumarate--CoA ligase 1-like [Jatropha curcas]
11 Hb_059226_020 0.1401232398 - - hypothetical protein B456_008G287700 [Gossypium raimondii]
12 Hb_000334_090 0.1403349599 - - hypothetical protein JCGZ_16789 [Jatropha curcas]
13 Hb_004926_010 0.1405666711 - - hypothetical protein JCGZ_27059 [Jatropha curcas]
14 Hb_030088_010 0.1417600855 - - basic blue copper family protein [Populus trichocarpa]
15 Hb_004319_100 0.1420235137 - - PREDICTED: gibberellin-regulated protein 14 isoform X3 [Jatropha curcas]
16 Hb_066207_020 0.1427830697 - - hypothetical protein JCGZ_22048 [Jatropha curcas]
17 Hb_110631_010 0.1439002559 - - hypothetical protein JCGZ_04359 [Jatropha curcas]
18 Hb_002020_010 0.1508069393 - - kinase-like protein [Corylus avellana]
19 Hb_000740_080 0.1541786243 - - -
20 Hb_085829_010 0.1543232815 - - PREDICTED: homeobox protein 2-like [Jatropha curcas]

Gene co-expression network

sample Hb_006351_040 Hb_006351_040 Hb_001091_040 Hb_001091_040 Hb_006351_040--Hb_001091_040 Hb_039946_040 Hb_039946_040 Hb_006351_040--Hb_039946_040 Hb_000139_460 Hb_000139_460 Hb_006351_040--Hb_000139_460 Hb_000086_510 Hb_000086_510 Hb_006351_040--Hb_000086_510 Hb_019299_020 Hb_019299_020 Hb_006351_040--Hb_019299_020 Hb_004397_010 Hb_004397_010 Hb_006351_040--Hb_004397_010 Hb_001091_040--Hb_000139_460 Hb_001091_040--Hb_039946_040 Hb_004926_010 Hb_004926_010 Hb_001091_040--Hb_004926_010 Hb_004031_060 Hb_004031_060 Hb_001091_040--Hb_004031_060 Hb_002020_010 Hb_002020_010 Hb_001091_040--Hb_002020_010 Hb_059226_020 Hb_059226_020 Hb_039946_040--Hb_059226_020 Hb_004319_100 Hb_004319_100 Hb_039946_040--Hb_004319_100 Hb_039946_040--Hb_004926_010 Hb_000194_030 Hb_000194_030 Hb_039946_040--Hb_000194_030 Hb_000139_460--Hb_019299_020 Hb_003371_030 Hb_003371_030 Hb_000139_460--Hb_003371_030 Hb_002304_110 Hb_002304_110 Hb_000139_460--Hb_002304_110 Hb_005144_150 Hb_005144_150 Hb_000139_460--Hb_005144_150 Hb_085829_010 Hb_085829_010 Hb_000086_510--Hb_085829_010 Hb_000334_090 Hb_000334_090 Hb_000086_510--Hb_000334_090 Hb_165110_010 Hb_165110_010 Hb_000086_510--Hb_165110_010 Hb_000320_240 Hb_000320_240 Hb_000086_510--Hb_000320_240 Hb_000157_020 Hb_000157_020 Hb_000086_510--Hb_000157_020 Hb_000243_340 Hb_000243_340 Hb_000086_510--Hb_000243_340 Hb_000740_080 Hb_000740_080 Hb_019299_020--Hb_000740_080 Hb_019299_020--Hb_002304_110 Hb_001257_140 Hb_001257_140 Hb_019299_020--Hb_001257_140 Hb_010863_020 Hb_010863_020 Hb_019299_020--Hb_010863_020 Hb_000352_360 Hb_000352_360 Hb_019299_020--Hb_000352_360 Hb_004397_010--Hb_059226_020 Hb_120357_010 Hb_120357_010 Hb_004397_010--Hb_120357_010 Hb_162815_010 Hb_162815_010 Hb_004397_010--Hb_162815_010 Hb_030088_010 Hb_030088_010 Hb_004397_010--Hb_030088_010 Hb_066207_020 Hb_066207_020 Hb_004397_010--Hb_066207_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.477908 2.17349 16.9117 0.190162 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 2.40826 0.5401

CAGE analysis