Hb_001091_040

Information

Type -
Description -
Location Contig1091: 36181-37343
Sequence    

Annotation

kegg
ID tcc:TCM_019825
description Cc-nbs-lrr resistance protein, putative
nr
ID KDP44704.1
description hypothetical protein JCGZ_01204 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LK89
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01204 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001091_040 0.0 - - hypothetical protein JCGZ_01204 [Jatropha curcas]
2 Hb_006351_040 0.0859945589 - - conserved hypothetical protein [Ricinus communis]
3 Hb_000139_460 0.0983782572 - - basic 7S globulin 2 precursor small subunit, putative [Ricinus communis]
4 Hb_039946_040 0.109056025 - - PREDICTED: sugar transport protein 14-like [Jatropha curcas]
5 Hb_004926_010 0.1115645593 - - hypothetical protein JCGZ_27059 [Jatropha curcas]
6 Hb_004031_060 0.1120701619 - - hypothetical protein B456_007G3219002, partial [Gossypium raimondii]
7 Hb_002020_010 0.1143054207 - - kinase-like protein [Corylus avellana]
8 Hb_000086_530 0.1240383201 - - conserved hypothetical protein [Ricinus communis]
9 Hb_030088_010 0.1261975864 - - basic blue copper family protein [Populus trichocarpa]
10 Hb_019053_050 0.1297592438 - - ubiquitin-protein ligase, putative [Ricinus communis]
11 Hb_019299_020 0.1301272576 - - PREDICTED: putative kinase-like protein TMKL1 [Jatropha curcas]
12 Hb_005144_150 0.1336423961 - - hypothetical protein VITISV_013572 [Vitis vinifera]
13 Hb_066207_020 0.1379242573 - - hypothetical protein JCGZ_22048 [Jatropha curcas]
14 Hb_059226_020 0.1403604266 - - hypothetical protein B456_008G287700 [Gossypium raimondii]
15 Hb_004397_010 0.1408822982 - - Receptor protein kinase CLAVATA1 precursor, putative [Ricinus communis]
16 Hb_002304_110 0.1417010815 - - hypothetical protein MIMGU_mgv1a023246mg [Erythranthe guttata]
17 Hb_000352_360 0.1428701627 - - PREDICTED: 4-coumarate--CoA ligase 1-like [Jatropha curcas]
18 Hb_000327_100 0.1461413495 - - hypothetical protein JCGZ_06658 [Jatropha curcas]
19 Hb_000194_030 0.1464722493 transcription factor TF Family: NAC NAC transcription factor 059 [Jatropha curcas]
20 Hb_016120_030 0.1470480707 - - hypothetical protein EUGRSUZ_D00080 [Eucalyptus grandis]

Gene co-expression network

sample Hb_001091_040 Hb_001091_040 Hb_006351_040 Hb_006351_040 Hb_001091_040--Hb_006351_040 Hb_000139_460 Hb_000139_460 Hb_001091_040--Hb_000139_460 Hb_039946_040 Hb_039946_040 Hb_001091_040--Hb_039946_040 Hb_004926_010 Hb_004926_010 Hb_001091_040--Hb_004926_010 Hb_004031_060 Hb_004031_060 Hb_001091_040--Hb_004031_060 Hb_002020_010 Hb_002020_010 Hb_001091_040--Hb_002020_010 Hb_006351_040--Hb_039946_040 Hb_006351_040--Hb_000139_460 Hb_000086_510 Hb_000086_510 Hb_006351_040--Hb_000086_510 Hb_019299_020 Hb_019299_020 Hb_006351_040--Hb_019299_020 Hb_004397_010 Hb_004397_010 Hb_006351_040--Hb_004397_010 Hb_000139_460--Hb_019299_020 Hb_003371_030 Hb_003371_030 Hb_000139_460--Hb_003371_030 Hb_002304_110 Hb_002304_110 Hb_000139_460--Hb_002304_110 Hb_005144_150 Hb_005144_150 Hb_000139_460--Hb_005144_150 Hb_059226_020 Hb_059226_020 Hb_039946_040--Hb_059226_020 Hb_004319_100 Hb_004319_100 Hb_039946_040--Hb_004319_100 Hb_039946_040--Hb_004926_010 Hb_000194_030 Hb_000194_030 Hb_039946_040--Hb_000194_030 Hb_004926_010--Hb_000194_030 Hb_159012_010 Hb_159012_010 Hb_004926_010--Hb_159012_010 Hb_000480_050 Hb_000480_050 Hb_004926_010--Hb_000480_050 Hb_004926_010--Hb_004031_060 Hb_002999_010 Hb_002999_010 Hb_004926_010--Hb_002999_010 Hb_007426_100 Hb_007426_100 Hb_004926_010--Hb_007426_100 Hb_016120_030 Hb_016120_030 Hb_004031_060--Hb_016120_030 Hb_004031_060--Hb_002999_010 Hb_019053_050 Hb_019053_050 Hb_004031_060--Hb_019053_050 Hb_004031_060--Hb_000480_050 Hb_000237_060 Hb_000237_060 Hb_002020_010--Hb_000237_060 Hb_000086_530 Hb_000086_530 Hb_002020_010--Hb_000086_530 Hb_002020_010--Hb_005144_150 Hb_141096_010 Hb_141096_010 Hb_002020_010--Hb_141096_010 Hb_001856_260 Hb_001856_260 Hb_002020_010--Hb_001856_260
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.358048 1.91425 22.0199 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 2.66521 0.806188

CAGE analysis