Hb_002003_100

Information

Type -
Description -
Location Contig2003: 166229-166594
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002003_100 0.0 - - -
2 Hb_003988_020 0.1279750717 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH85-like [Populus euphratica]
3 Hb_004330_060 0.1575388042 - - hypothetical protein POPTR_0011s01530g [Populus trichocarpa]
4 Hb_000042_350 0.1591399666 - - hypothetical protein JCGZ_00710 [Jatropha curcas]
5 Hb_000935_060 0.1773077246 - - PREDICTED: 1-aminocyclopropane-1-carboxylate synthase 8-like [Jatropha curcas]
6 Hb_004102_150 0.1774830333 - - Late embryogenesis abundant protein D-7, putative [Ricinus communis]
7 Hb_000926_240 0.1872364062 - - hypothetical protein PRUPE_ppb018041mg [Prunus persica]
8 Hb_000917_070 0.1887459085 - - conserved hypothetical protein [Ricinus communis]
9 Hb_005144_140 0.1899800085 - - conserved hypothetical protein [Ricinus communis]
10 Hb_039946_040 0.1901333537 - - PREDICTED: sugar transport protein 14-like [Jatropha curcas]
11 Hb_010068_010 0.1955421807 - - PREDICTED: uncharacterized protein LOC105633273 [Jatropha curcas]
12 Hb_160479_010 0.1962882708 - - hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis]
13 Hb_073870_010 0.1982411112 - - hypothetical protein RCOM_0725510 [Ricinus communis]
14 Hb_001369_510 0.199958171 - - PREDICTED: uncharacterized protein LOC105766768 [Gossypium raimondii]
15 Hb_007138_010 0.2006194596 - - PREDICTED: putative laccase-9 [Jatropha curcas]
16 Hb_005348_020 0.2007707149 - - conserved hypothetical protein [Ricinus communis]
17 Hb_100953_010 0.2012495274 - - hypothetical protein JCGZ_10310 [Jatropha curcas]
18 Hb_033691_010 0.2043189033 - - Lignin-forming anionic peroxidase precursor, putative [Ricinus communis]
19 Hb_001404_060 0.2085210774 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
20 Hb_000740_140 0.2100015162 transcription factor TF Family: OFP PREDICTED: probable transcription repressor OFP9 [Jatropha curcas]

Gene co-expression network

sample Hb_002003_100 Hb_002003_100 Hb_003988_020 Hb_003988_020 Hb_002003_100--Hb_003988_020 Hb_004330_060 Hb_004330_060 Hb_002003_100--Hb_004330_060 Hb_000042_350 Hb_000042_350 Hb_002003_100--Hb_000042_350 Hb_000935_060 Hb_000935_060 Hb_002003_100--Hb_000935_060 Hb_004102_150 Hb_004102_150 Hb_002003_100--Hb_004102_150 Hb_000926_240 Hb_000926_240 Hb_002003_100--Hb_000926_240 Hb_003988_020--Hb_000042_350 Hb_001396_270 Hb_001396_270 Hb_003988_020--Hb_001396_270 Hb_000164_210 Hb_000164_210 Hb_003988_020--Hb_000164_210 Hb_034858_010 Hb_034858_010 Hb_003988_020--Hb_034858_010 Hb_000042_120 Hb_000042_120 Hb_003988_020--Hb_000042_120 Hb_059226_020 Hb_059226_020 Hb_004330_060--Hb_059226_020 Hb_039946_040 Hb_039946_040 Hb_004330_060--Hb_039946_040 Hb_159012_010 Hb_159012_010 Hb_004330_060--Hb_159012_010 Hb_000480_050 Hb_000480_050 Hb_004330_060--Hb_000480_050 Hb_082733_010 Hb_082733_010 Hb_004330_060--Hb_082733_010 Hb_000042_350--Hb_004330_060 Hb_000042_350--Hb_001396_270 Hb_000042_350--Hb_039946_040 Hb_000042_350--Hb_000164_210 Hb_000935_060--Hb_004102_150 Hb_000935_060--Hb_000926_240 Hb_000917_070 Hb_000917_070 Hb_000935_060--Hb_000917_070 Hb_005144_140 Hb_005144_140 Hb_000935_060--Hb_005144_140 Hb_010068_010 Hb_010068_010 Hb_000935_060--Hb_010068_010 Hb_160479_010 Hb_160479_010 Hb_000935_060--Hb_160479_010 Hb_004102_150--Hb_000917_070 Hb_004102_150--Hb_000926_240 Hb_004102_150--Hb_005144_140 Hb_004102_150--Hb_010068_010 Hb_005348_020 Hb_005348_020 Hb_004102_150--Hb_005348_020 Hb_000926_240--Hb_010068_010 Hb_000926_240--Hb_160479_010 Hb_004317_020 Hb_004317_020 Hb_000926_240--Hb_004317_020 Hb_000926_240--Hb_034858_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0999185 0 0.17212 1.19078 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.163503 0

CAGE analysis