Hb_001195_670

Information

Type -
Description -
Location Contig1195: 481751-482923
Sequence    

Annotation

kegg
ID pop:POPTR_0014s04020g
description hypothetical protein
nr
ID XP_012071775.1
description PREDICTED: pathogenesis-related protein 5 [Jatropha curcas]
swissprot
ID P28493
description Pathogenesis-related protein 5 OS=Arabidopsis thaliana GN=At1g75040 PE=1 SV=1
trembl
ID A0A067KQP6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04387 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_05870: 481682-482852
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001195_670 0.0 - - PREDICTED: pathogenesis-related protein 5 [Jatropha curcas]
2 Hb_000450_170 0.128088112 - - conserved hypothetical protein [Ricinus communis]
3 Hb_005529_020 0.1577648504 - - PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 32 [Jatropha curcas]
4 Hb_000028_620 0.1775412763 - - conserved hypothetical protein [Ricinus communis]
5 Hb_003001_050 0.1807198971 - - hypothetical protein RCOM_1749890 [Ricinus communis]
6 Hb_000015_140 0.1882195183 - - PREDICTED: CASP-like protein 4C1 [Vitis vinifera]
7 Hb_066207_020 0.1905997967 - - hypothetical protein JCGZ_22048 [Jatropha curcas]
8 Hb_059226_020 0.1952407944 - - hypothetical protein B456_008G287700 [Gossypium raimondii]
9 Hb_030088_010 0.1961637664 - - basic blue copper family protein [Populus trichocarpa]
10 Hb_004397_010 0.2015224555 - - Receptor protein kinase CLAVATA1 precursor, putative [Ricinus communis]
11 Hb_000139_460 0.2039143862 - - basic 7S globulin 2 precursor small subunit, putative [Ricinus communis]
12 Hb_039946_040 0.2044573716 - - PREDICTED: sugar transport protein 14-like [Jatropha curcas]
13 Hb_001616_100 0.2065091784 - - PREDICTED: cell division control protein 45 homolog [Jatropha curcas]
14 Hb_001091_040 0.2087602171 - - hypothetical protein JCGZ_01204 [Jatropha curcas]
15 Hb_000027_280 0.2103568085 - - PREDICTED: uncharacterized protein LOC105642051 [Jatropha curcas]
16 Hb_110631_010 0.2108605087 - - hypothetical protein JCGZ_04359 [Jatropha curcas]
17 Hb_006351_040 0.2110817804 - - conserved hypothetical protein [Ricinus communis]
18 Hb_000890_120 0.2119895785 - - PREDICTED: proline-rich receptor-like protein kinase PERK3 isoform X1 [Jatropha curcas]
19 Hb_001248_120 0.2130892592 - - conserved hypothetical protein [Ricinus communis]
20 Hb_000015_190 0.213415334 - - PREDICTED: uncharacterized protein LOC105647810 [Jatropha curcas]

Gene co-expression network

sample Hb_001195_670 Hb_001195_670 Hb_000450_170 Hb_000450_170 Hb_001195_670--Hb_000450_170 Hb_005529_020 Hb_005529_020 Hb_001195_670--Hb_005529_020 Hb_000028_620 Hb_000028_620 Hb_001195_670--Hb_000028_620 Hb_003001_050 Hb_003001_050 Hb_001195_670--Hb_003001_050 Hb_000015_140 Hb_000015_140 Hb_001195_670--Hb_000015_140 Hb_066207_020 Hb_066207_020 Hb_001195_670--Hb_066207_020 Hb_000320_030 Hb_000320_030 Hb_000450_170--Hb_000320_030 Hb_000313_280 Hb_000313_280 Hb_000450_170--Hb_000313_280 Hb_000450_170--Hb_000015_140 Hb_000450_170--Hb_005529_020 Hb_002894_070 Hb_002894_070 Hb_000450_170--Hb_002894_070 Hb_001186_110 Hb_001186_110 Hb_005529_020--Hb_001186_110 Hb_014720_100 Hb_014720_100 Hb_005529_020--Hb_014720_100 Hb_005529_020--Hb_003001_050 Hb_006538_160 Hb_006538_160 Hb_005529_020--Hb_006538_160 Hb_009615_030 Hb_009615_030 Hb_000028_620--Hb_009615_030 Hb_000552_060 Hb_000552_060 Hb_000028_620--Hb_000552_060 Hb_002580_020 Hb_002580_020 Hb_000028_620--Hb_002580_020 Hb_081191_010 Hb_081191_010 Hb_000028_620--Hb_081191_010 Hb_000749_160 Hb_000749_160 Hb_000028_620--Hb_000749_160 Hb_002097_180 Hb_002097_180 Hb_000028_620--Hb_002097_180 Hb_000015_190 Hb_000015_190 Hb_003001_050--Hb_000015_190 Hb_001616_010 Hb_001616_010 Hb_003001_050--Hb_001616_010 Hb_000561_040 Hb_000561_040 Hb_003001_050--Hb_000561_040 Hb_003001_050--Hb_001186_110 Hb_002616_020 Hb_002616_020 Hb_003001_050--Hb_002616_020 Hb_001616_100 Hb_001616_100 Hb_003001_050--Hb_001616_100 Hb_000015_140--Hb_066207_020 Hb_000740_080 Hb_000740_080 Hb_000015_140--Hb_000740_080 Hb_002768_040 Hb_002768_040 Hb_000015_140--Hb_002768_040 Hb_000897_010 Hb_000897_010 Hb_000015_140--Hb_000897_010 Hb_019299_020 Hb_019299_020 Hb_000015_140--Hb_019299_020 Hb_002122_060 Hb_002122_060 Hb_000015_140--Hb_002122_060 Hb_059226_020 Hb_059226_020 Hb_066207_020--Hb_059226_020 Hb_066207_020--Hb_000740_080 Hb_066207_020--Hb_000897_010 Hb_004397_010 Hb_004397_010 Hb_066207_020--Hb_004397_010 Hb_004926_010 Hb_004926_010 Hb_066207_020--Hb_004926_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0446913 0.197984 1.52914 13.0704 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.716606 0.362317 0.14812 3.10897 0.329236

CAGE analysis