Hb_009615_030

Information

Type -
Description -
Location Contig9615: 13503-15299
Sequence    

Annotation

kegg
ID rcu:RCOM_1454170
description serine-threonine protein kinase, plant-type, putative (EC:1.3.1.74)
nr
ID XP_002513136.1
description serine-threonine protein kinase, plant-type, putative [Ricinus communis]
swissprot
ID Q9LZV7
description Leucine-rich repeat receptor-like protein kinase PXC2 OS=Arabidopsis thaliana GN=PXC2 PE=2 SV=1
trembl
ID B9RGI4
description Serine-threonine protein kinase, plant-type, putative OS=Ricinus communis GN=RCOM_1454170 PE=4 SV=1
Gene Ontology
ID GO:0005618
description probable leucine-rich repeat receptor-like protein kinase at1g35710

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_009615_030 0.0 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
2 Hb_002580_020 0.0771861313 - - hypothetical protein JCGZ_19971 [Jatropha curcas]
3 Hb_081191_010 0.0992581806 - - PREDICTED: pathogenesis-related protein PR-1-like [Jatropha curcas]
4 Hb_003177_100 0.1111680258 - - PREDICTED: auxin-induced protein 6B [Jatropha curcas]
5 Hb_000749_160 0.1169373907 - - calmodulin binding protein, putative [Ricinus communis]
6 Hb_002097_180 0.1210255202 - - PREDICTED: probable pectate lyase 12 isoform X1 [Jatropha curcas]
7 Hb_000429_030 0.1224196328 - - Receptor protein kinase CLAVATA1 precursor, putative [Ricinus communis]
8 Hb_000028_620 0.1233472948 - - conserved hypothetical protein [Ricinus communis]
9 Hb_002818_170 0.1320309082 - - hypothetical protein POPTR_0014s10650g [Populus trichocarpa]
10 Hb_000552_060 0.1392480196 - - PREDICTED: theobromine synthase 2-like isoform X3 [Jatropha curcas]
11 Hb_003964_060 0.1448490838 - - PREDICTED: beta-glucosidase 40 [Jatropha curcas]
12 Hb_004397_010 0.1475277693 - - Receptor protein kinase CLAVATA1 precursor, putative [Ricinus communis]
13 Hb_003811_050 0.1507071003 - - hypothetical protein JCGZ_01310 [Jatropha curcas]
14 Hb_170861_010 0.1507402537 - - Receptor protein kinase CLAVATA1 precursor, putative [Ricinus communis]
15 Hb_004984_020 0.1517190185 - - PREDICTED: uncharacterized protein LOC105647814 [Jatropha curcas]
16 Hb_002601_040 0.1543401186 - - hypothetical protein JCGZ_06197 [Jatropha curcas]
17 Hb_008727_040 0.1558016234 - - conserved hypothetical protein [Ricinus communis]
18 Hb_000676_130 0.1565614429 - - PREDICTED: peroxidase 72-like [Nelumbo nucifera]
19 Hb_001863_520 0.1582920013 - - conserved hypothetical protein [Ricinus communis]
20 Hb_002025_380 0.1590025676 - - Uncharacterized protein TCM_011176 [Theobroma cacao]

Gene co-expression network

sample Hb_009615_030 Hb_009615_030 Hb_002580_020 Hb_002580_020 Hb_009615_030--Hb_002580_020 Hb_081191_010 Hb_081191_010 Hb_009615_030--Hb_081191_010 Hb_003177_100 Hb_003177_100 Hb_009615_030--Hb_003177_100 Hb_000749_160 Hb_000749_160 Hb_009615_030--Hb_000749_160 Hb_002097_180 Hb_002097_180 Hb_009615_030--Hb_002097_180 Hb_000429_030 Hb_000429_030 Hb_009615_030--Hb_000429_030 Hb_002580_020--Hb_081191_010 Hb_003811_050 Hb_003811_050 Hb_002580_020--Hb_003811_050 Hb_000676_130 Hb_000676_130 Hb_002580_020--Hb_000676_130 Hb_006834_010 Hb_006834_010 Hb_002580_020--Hb_006834_010 Hb_000853_010 Hb_000853_010 Hb_002580_020--Hb_000853_010 Hb_081191_010--Hb_003811_050 Hb_081191_010--Hb_000429_030 Hb_081191_010--Hb_003177_100 Hb_002413_030 Hb_002413_030 Hb_081191_010--Hb_002413_030 Hb_004785_150 Hb_004785_150 Hb_003177_100--Hb_004785_150 Hb_003177_100--Hb_002580_020 Hb_001863_520 Hb_001863_520 Hb_003177_100--Hb_001863_520 Hb_161346_010 Hb_161346_010 Hb_003177_100--Hb_161346_010 Hb_003964_060 Hb_003964_060 Hb_000749_160--Hb_003964_060 Hb_000676_170 Hb_000676_170 Hb_000749_160--Hb_000676_170 Hb_008727_040 Hb_008727_040 Hb_000749_160--Hb_008727_040 Hb_005144_080 Hb_005144_080 Hb_000749_160--Hb_005144_080 Hb_000749_160--Hb_002580_020 Hb_002818_170 Hb_002818_170 Hb_002097_180--Hb_002818_170 Hb_002025_380 Hb_002025_380 Hb_002097_180--Hb_002025_380 Hb_003189_010 Hb_003189_010 Hb_002097_180--Hb_003189_010 Hb_006501_100 Hb_006501_100 Hb_002097_180--Hb_006501_100 Hb_006277_030 Hb_006277_030 Hb_002097_180--Hb_006277_030 Hb_003371_040 Hb_003371_040 Hb_000429_030--Hb_003371_040 Hb_003171_070 Hb_003171_070 Hb_000429_030--Hb_003171_070 Hb_170861_010 Hb_170861_010 Hb_000429_030--Hb_170861_010 Hb_007161_020 Hb_007161_020 Hb_000429_030--Hb_007161_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0138779 0.530758 1.89017 8.33739 0.0530747 0.0206906
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 4.93307 0.547895

CAGE analysis