Hb_000749_160

Information

Type -
Description -
Location Contig749: 152994-162984
Sequence    

Annotation

kegg
ID rcu:RCOM_1124820
description calmodulin binding protein, putative
nr
ID XP_002528562.1
description calmodulin binding protein, putative [Ricinus communis]
swissprot
ID Q9FI00
description MLO-like protein 11 OS=Arabidopsis thaliana GN=MLO11 PE=2 SV=1
trembl
ID B9SRE3
description MLO-like protein OS=Ricinus communis GN=MLO PE=3 SV=1
Gene Ontology
ID GO:0016021
description mlo-like protein 11 isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_56795: 153640-155492 , PASA_asmbl_56796: 155690-162248
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000749_160 0.0 - - calmodulin binding protein, putative [Ricinus communis]
2 Hb_009615_030 0.1169373907 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
3 Hb_003964_060 0.1202575292 - - PREDICTED: beta-glucosidase 40 [Jatropha curcas]
4 Hb_000676_170 0.1245528518 - - PREDICTED: bifunctional epoxide hydrolase 2 [Jatropha curcas]
5 Hb_008727_040 0.1269085873 - - conserved hypothetical protein [Ricinus communis]
6 Hb_005144_080 0.1330401299 - - Serine carboxypeptidase, putative [Ricinus communis]
7 Hb_002580_020 0.1379190703 - - hypothetical protein JCGZ_19971 [Jatropha curcas]
8 Hb_000429_030 0.137971591 - - Receptor protein kinase CLAVATA1 precursor, putative [Ricinus communis]
9 Hb_002592_050 0.1411688942 - - PREDICTED: LON peptidase N-terminal domain and RING finger protein 1-like [Jatropha curcas]
10 Hb_004282_010 0.1418601527 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At2g24230 [Jatropha curcas]
11 Hb_129637_010 0.1418608814 - - PREDICTED: alpha-mannosidase isoform X1 [Populus euphratica]
12 Hb_005489_120 0.142299037 - - leucine rich repeat receptor kinase, putative [Ricinus communis]
13 Hb_001053_110 0.1434034463 - - PREDICTED: uncharacterized protein LOC105628699 [Jatropha curcas]
14 Hb_000956_070 0.1456357741 - - PREDICTED: probable serine/threonine-protein kinase At1g01540 [Jatropha curcas]
15 Hb_007138_030 0.1461245017 - - PREDICTED: putative disease resistance protein At4g11170 [Jatropha curcas]
16 Hb_002025_050 0.1490711763 - - conserved hypothetical protein [Ricinus communis]
17 Hb_029866_080 0.1495550347 - - PREDICTED: probable inactive receptor kinase At4g23740 [Jatropha curcas]
18 Hb_005333_120 0.1500490818 - - PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 2 [Jatropha curcas]
19 Hb_000028_620 0.1505559726 - - conserved hypothetical protein [Ricinus communis]
20 Hb_000417_350 0.1505856167 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_000749_160 Hb_000749_160 Hb_009615_030 Hb_009615_030 Hb_000749_160--Hb_009615_030 Hb_003964_060 Hb_003964_060 Hb_000749_160--Hb_003964_060 Hb_000676_170 Hb_000676_170 Hb_000749_160--Hb_000676_170 Hb_008727_040 Hb_008727_040 Hb_000749_160--Hb_008727_040 Hb_005144_080 Hb_005144_080 Hb_000749_160--Hb_005144_080 Hb_002580_020 Hb_002580_020 Hb_000749_160--Hb_002580_020 Hb_009615_030--Hb_002580_020 Hb_081191_010 Hb_081191_010 Hb_009615_030--Hb_081191_010 Hb_003177_100 Hb_003177_100 Hb_009615_030--Hb_003177_100 Hb_002097_180 Hb_002097_180 Hb_009615_030--Hb_002097_180 Hb_000429_030 Hb_000429_030 Hb_009615_030--Hb_000429_030 Hb_000070_070 Hb_000070_070 Hb_003964_060--Hb_000070_070 Hb_003964_060--Hb_008727_040 Hb_002025_050 Hb_002025_050 Hb_003964_060--Hb_002025_050 Hb_023956_010 Hb_023956_010 Hb_003964_060--Hb_023956_010 Hb_003964_060--Hb_000676_170 Hb_002374_060 Hb_002374_060 Hb_000676_170--Hb_002374_060 Hb_005489_120 Hb_005489_120 Hb_000676_170--Hb_005489_120 Hb_000479_230 Hb_000479_230 Hb_000676_170--Hb_000479_230 Hb_000069_520 Hb_000069_520 Hb_000676_170--Hb_000069_520 Hb_003266_060 Hb_003266_060 Hb_000676_170--Hb_003266_060 Hb_004282_010 Hb_004282_010 Hb_008727_040--Hb_004282_010 Hb_012787_050 Hb_012787_050 Hb_008727_040--Hb_012787_050 Hb_001568_010 Hb_001568_010 Hb_008727_040--Hb_001568_010 Hb_085315_010 Hb_085315_010 Hb_008727_040--Hb_085315_010 Hb_000956_070 Hb_000956_070 Hb_008727_040--Hb_000956_070 Hb_006846_030 Hb_006846_030 Hb_008727_040--Hb_006846_030 Hb_002025_380 Hb_002025_380 Hb_005144_080--Hb_002025_380 Hb_006277_030 Hb_006277_030 Hb_005144_080--Hb_006277_030 Hb_005144_080--Hb_004282_010 Hb_005731_070 Hb_005731_070 Hb_005144_080--Hb_005731_070 Hb_005839_030 Hb_005839_030 Hb_005144_080--Hb_005839_030 Hb_011129_020 Hb_011129_020 Hb_005144_080--Hb_011129_020 Hb_002580_020--Hb_081191_010 Hb_003811_050 Hb_003811_050 Hb_002580_020--Hb_003811_050 Hb_000676_130 Hb_000676_130 Hb_002580_020--Hb_000676_130 Hb_006834_010 Hb_006834_010 Hb_002580_020--Hb_006834_010 Hb_000853_010 Hb_000853_010 Hb_002580_020--Hb_000853_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0664454 0.63276 1.09676 4.40071 0.0359908 0.0138274
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0167519 0.039546 0.0503096 3.36992 0.420755

CAGE analysis