Hb_085315_010

Information

Type -
Description -
Location Contig85315: 1134-1908
Sequence    

Annotation

kegg
ID mdm:103424085
description uncharacterized LOC103424085
nr
ID XP_012069768.1
description PREDICTED: uncharacterized protein LOC105632092 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KVY3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02280 PE=4 SV=1
Gene Ontology
ID GO:0016020
description p-loop containing nucleoside triphosphate hydrolases superfamily protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_085315_010 0.0 - - PREDICTED: uncharacterized protein LOC105632092 [Jatropha curcas]
2 Hb_164117_010 0.089729491 - - hypothetical protein PHAVU_004G0480000g [Phaseolus vulgaris]
3 Hb_008727_040 0.1022185687 - - conserved hypothetical protein [Ricinus communis]
4 Hb_006846_030 0.1080252604 - - respiratory burst oxidase A [Manihot esculenta]
5 Hb_012787_050 0.1159032291 - - PREDICTED: glutathione S-transferase U18-like [Jatropha curcas]
6 Hb_004893_010 0.1165034675 - - PREDICTED: O-acyltransferase WSD1-like [Jatropha curcas]
7 Hb_000127_080 0.1177971693 - - hypothetical protein POPTR_0005s21760g [Populus trichocarpa]
8 Hb_032260_130 0.1179300154 - - hypothetical protein POPTR_0003s13800g [Populus trichocarpa]
9 Hb_001568_010 0.125481515 - - conserved hypothetical protein [Ricinus communis]
10 Hb_002448_020 0.1301236872 transcription factor TF Family: SBP Squamosa promoter-binding protein, putative [Ricinus communis]
11 Hb_002333_010 0.1306805019 - - hypothetical protein JCGZ_18834 [Jatropha curcas]
12 Hb_004282_010 0.1309773096 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At2g24230 [Jatropha curcas]
13 Hb_001663_120 0.1327351949 - - PREDICTED: formin-like protein 1 isoform X1 [Jatropha curcas]
14 Hb_007632_130 0.1333406819 - - PREDICTED: nudix hydrolase 10-like isoform X1 [Jatropha curcas]
15 Hb_004785_090 0.135867169 - - hypothetical protein MIMGU_mgv1a018797mg [Erythranthe guttata]
16 Hb_002042_160 0.1368522917 - - chloroplast-targeted copper chaperone, putative [Ricinus communis]
17 Hb_116194_010 0.1387886755 - - NBS-LRR resistance protein RGH1 [Manihot esculenta]
18 Hb_029866_080 0.1387893496 - - PREDICTED: probable inactive receptor kinase At4g23740 [Jatropha curcas]
19 Hb_019026_050 0.1390855701 - - conserved hypothetical protein [Ricinus communis]
20 Hb_000014_080 0.1390954057 - - PREDICTED: UDP-glycosyltransferase 87A1-like [Jatropha curcas]

Gene co-expression network

sample Hb_085315_010 Hb_085315_010 Hb_164117_010 Hb_164117_010 Hb_085315_010--Hb_164117_010 Hb_008727_040 Hb_008727_040 Hb_085315_010--Hb_008727_040 Hb_006846_030 Hb_006846_030 Hb_085315_010--Hb_006846_030 Hb_012787_050 Hb_012787_050 Hb_085315_010--Hb_012787_050 Hb_004893_010 Hb_004893_010 Hb_085315_010--Hb_004893_010 Hb_000127_080 Hb_000127_080 Hb_085315_010--Hb_000127_080 Hb_032260_130 Hb_032260_130 Hb_164117_010--Hb_032260_130 Hb_164117_010--Hb_004893_010 Hb_116194_010 Hb_116194_010 Hb_164117_010--Hb_116194_010 Hb_019026_050 Hb_019026_050 Hb_164117_010--Hb_019026_050 Hb_164117_010--Hb_000127_080 Hb_004282_010 Hb_004282_010 Hb_008727_040--Hb_004282_010 Hb_008727_040--Hb_012787_050 Hb_001568_010 Hb_001568_010 Hb_008727_040--Hb_001568_010 Hb_000956_070 Hb_000956_070 Hb_008727_040--Hb_000956_070 Hb_008727_040--Hb_006846_030 Hb_003847_050 Hb_003847_050 Hb_006846_030--Hb_003847_050 Hb_006846_030--Hb_012787_050 Hb_023956_010 Hb_023956_010 Hb_006846_030--Hb_023956_010 Hb_006846_030--Hb_001568_010 Hb_002448_020 Hb_002448_020 Hb_006846_030--Hb_002448_020 Hb_006846_030--Hb_019026_050 Hb_000070_070 Hb_000070_070 Hb_012787_050--Hb_000070_070 Hb_012787_050--Hb_023956_010 Hb_002333_010 Hb_002333_010 Hb_012787_050--Hb_002333_010 Hb_012787_050--Hb_003847_050 Hb_008304_050 Hb_008304_050 Hb_004893_010--Hb_008304_050 Hb_003633_170 Hb_003633_170 Hb_004893_010--Hb_003633_170 Hb_004893_010--Hb_032260_130 Hb_031224_010 Hb_031224_010 Hb_004893_010--Hb_031224_010 Hb_003304_090 Hb_003304_090 Hb_004893_010--Hb_003304_090 Hb_000127_080--Hb_004282_010 Hb_006501_100 Hb_006501_100 Hb_000127_080--Hb_006501_100 Hb_000127_080--Hb_000956_070 Hb_007632_130 Hb_007632_130 Hb_000127_080--Hb_007632_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.122031 2.82276 1.95196 13.3534 0.0574175 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.14314 0 0 11.2149 5.0001

CAGE analysis