Hb_032260_130

Information

Type -
Description -
Location Contig32260: 132337-133764
Sequence    

Annotation

kegg
ID pop:POPTR_0003s13800g
description POPTRDRAFT_554472; hypothetical protein
nr
ID XP_002303638.2
description hypothetical protein POPTR_0003s13800g [Populus trichocarpa]
swissprot
ID Q9AR73
description Hydroquinone glucosyltransferase OS=Rauvolfia serpentina GN=AS PE=1 SV=1
trembl
ID B9GXG5
description Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s13800g PE=3 SV=2
Gene Ontology
ID GO:0016758
description hydroquinone glucosyltransferase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_032260_130 0.0 - - hypothetical protein POPTR_0003s13800g [Populus trichocarpa]
2 Hb_164117_010 0.0903410357 - - hypothetical protein PHAVU_004G0480000g [Phaseolus vulgaris]
3 Hb_004893_010 0.09319209 - - PREDICTED: O-acyltransferase WSD1-like [Jatropha curcas]
4 Hb_000115_290 0.0957432378 - - PREDICTED: uncharacterized protein LOC105124123 [Populus euphratica]
5 Hb_116194_010 0.1011181404 - - NBS-LRR resistance protein RGH1 [Manihot esculenta]
6 Hb_007632_130 0.1040556267 - - PREDICTED: nudix hydrolase 10-like isoform X1 [Jatropha curcas]
7 Hb_002374_520 0.1069681723 - - early nodulin 8 precursor family protein [Populus trichocarpa]
8 Hb_010417_090 0.117501528 - - PREDICTED: protein LURP-one-related 17 [Jatropha curcas]
9 Hb_085315_010 0.1179300154 - - PREDICTED: uncharacterized protein LOC105632092 [Jatropha curcas]
10 Hb_006846_030 0.1222375457 - - respiratory burst oxidase A [Manihot esculenta]
11 Hb_002553_070 0.1243540215 - - PREDICTED: RING-H2 finger protein ATL16 [Jatropha curcas]
12 Hb_000070_070 0.1261241324 - - PREDICTED: protein LURP-one-related 17 [Jatropha curcas]
13 Hb_002042_160 0.1266305152 - - chloroplast-targeted copper chaperone, putative [Ricinus communis]
14 Hb_019026_050 0.1268683 - - conserved hypothetical protein [Ricinus communis]
15 Hb_001728_130 0.1271572429 - - alcohol dehydrogenase, putative [Ricinus communis]
16 Hb_000994_100 0.1276195914 - - RALFL33, putative [Ricinus communis]
17 Hb_135720_010 0.1292560543 - - hypothetical protein JCGZ_17857 [Jatropha curcas]
18 Hb_000095_070 0.1314180685 - - conserved hypothetical protein [Ricinus communis]
19 Hb_012787_050 0.1316239373 - - PREDICTED: glutathione S-transferase U18-like [Jatropha curcas]
20 Hb_078361_010 0.1353430652 - - PREDICTED: AT-hook motif nuclear-localized protein 1 [Jatropha curcas]

Gene co-expression network

sample Hb_032260_130 Hb_032260_130 Hb_164117_010 Hb_164117_010 Hb_032260_130--Hb_164117_010 Hb_004893_010 Hb_004893_010 Hb_032260_130--Hb_004893_010 Hb_000115_290 Hb_000115_290 Hb_032260_130--Hb_000115_290 Hb_116194_010 Hb_116194_010 Hb_032260_130--Hb_116194_010 Hb_007632_130 Hb_007632_130 Hb_032260_130--Hb_007632_130 Hb_002374_520 Hb_002374_520 Hb_032260_130--Hb_002374_520 Hb_085315_010 Hb_085315_010 Hb_164117_010--Hb_085315_010 Hb_164117_010--Hb_004893_010 Hb_164117_010--Hb_116194_010 Hb_019026_050 Hb_019026_050 Hb_164117_010--Hb_019026_050 Hb_000127_080 Hb_000127_080 Hb_164117_010--Hb_000127_080 Hb_008304_050 Hb_008304_050 Hb_004893_010--Hb_008304_050 Hb_003633_170 Hb_003633_170 Hb_004893_010--Hb_003633_170 Hb_031224_010 Hb_031224_010 Hb_004893_010--Hb_031224_010 Hb_003304_090 Hb_003304_090 Hb_004893_010--Hb_003304_090 Hb_010417_090 Hb_010417_090 Hb_000115_290--Hb_010417_090 Hb_000115_290--Hb_116194_010 Hb_000994_100 Hb_000994_100 Hb_000115_290--Hb_000994_100 Hb_002970_070 Hb_002970_070 Hb_000115_290--Hb_002970_070 Hb_000115_290--Hb_002374_520 Hb_002042_160 Hb_002042_160 Hb_116194_010--Hb_002042_160 Hb_002814_050 Hb_002814_050 Hb_116194_010--Hb_002814_050 Hb_004785_090 Hb_004785_090 Hb_116194_010--Hb_004785_090 Hb_006846_030 Hb_006846_030 Hb_007632_130--Hb_006846_030 Hb_007632_130--Hb_019026_050 Hb_000120_320 Hb_000120_320 Hb_007632_130--Hb_000120_320 Hb_002553_070 Hb_002553_070 Hb_007632_130--Hb_002553_070 Hb_007632_130--Hb_164117_010 Hb_000899_060 Hb_000899_060 Hb_002374_520--Hb_000899_060 Hb_037684_010 Hb_037684_010 Hb_002374_520--Hb_037684_010 Hb_002598_020 Hb_002598_020 Hb_002374_520--Hb_002598_020 Hb_007237_080 Hb_007237_080 Hb_002374_520--Hb_007237_080 Hb_000453_290 Hb_000453_290 Hb_002374_520--Hb_000453_290
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0360813 12.4955 4.72626 38.3342 0.123198 0.0694261
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0260051 0.0487633 22.1252 14.115

CAGE analysis