Hb_164117_010

Information

Type -
Description -
Location Contig164117: 2085-3871
Sequence    

Annotation

kegg
ID pvu:PHAVU_004G0480000
description hypothetical protein
nr
ID XP_007151455.1
description hypothetical protein PHAVU_004G0480000g [Phaseolus vulgaris]
swissprot
ID -
description -
trembl
ID V7BZX0
description Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_004G0480000g PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_164117_010 0.0 - - hypothetical protein PHAVU_004G0480000g [Phaseolus vulgaris]
2 Hb_085315_010 0.089729491 - - PREDICTED: uncharacterized protein LOC105632092 [Jatropha curcas]
3 Hb_032260_130 0.0903410357 - - hypothetical protein POPTR_0003s13800g [Populus trichocarpa]
4 Hb_004893_010 0.0994005509 - - PREDICTED: O-acyltransferase WSD1-like [Jatropha curcas]
5 Hb_116194_010 0.112403024 - - NBS-LRR resistance protein RGH1 [Manihot esculenta]
6 Hb_019026_050 0.1130139172 - - conserved hypothetical protein [Ricinus communis]
7 Hb_000127_080 0.1163739287 - - hypothetical protein POPTR_0005s21760g [Populus trichocarpa]
8 Hb_007632_130 0.122052749 - - PREDICTED: nudix hydrolase 10-like isoform X1 [Jatropha curcas]
9 Hb_005545_110 0.1227069533 - - PREDICTED: protein trichome birefringence-like 33 [Jatropha curcas]
10 Hb_001728_130 0.122824917 - - alcohol dehydrogenase, putative [Ricinus communis]
11 Hb_004785_090 0.12523561 - - hypothetical protein MIMGU_mgv1a018797mg [Erythranthe guttata]
12 Hb_008727_040 0.1280675471 - - conserved hypothetical protein [Ricinus communis]
13 Hb_078361_010 0.1342655647 - - PREDICTED: AT-hook motif nuclear-localized protein 1 [Jatropha curcas]
14 Hb_006846_030 0.1355099234 - - respiratory burst oxidase A [Manihot esculenta]
15 Hb_000095_070 0.1366744487 - - conserved hypothetical protein [Ricinus communis]
16 Hb_000011_320 0.1388504411 - - PREDICTED: uncharacterized protein LOC105631328 [Jatropha curcas]
17 Hb_001663_120 0.1413024996 - - PREDICTED: formin-like protein 1 isoform X1 [Jatropha curcas]
18 Hb_000956_070 0.1474866768 - - PREDICTED: probable serine/threonine-protein kinase At1g01540 [Jatropha curcas]
19 Hb_008304_050 0.1476135328 - - PREDICTED: trans-cinnamate 4-monooxygenase [Jatropha curcas]
20 Hb_012787_050 0.1492580423 - - PREDICTED: glutathione S-transferase U18-like [Jatropha curcas]

Gene co-expression network

sample Hb_164117_010 Hb_164117_010 Hb_085315_010 Hb_085315_010 Hb_164117_010--Hb_085315_010 Hb_032260_130 Hb_032260_130 Hb_164117_010--Hb_032260_130 Hb_004893_010 Hb_004893_010 Hb_164117_010--Hb_004893_010 Hb_116194_010 Hb_116194_010 Hb_164117_010--Hb_116194_010 Hb_019026_050 Hb_019026_050 Hb_164117_010--Hb_019026_050 Hb_000127_080 Hb_000127_080 Hb_164117_010--Hb_000127_080 Hb_008727_040 Hb_008727_040 Hb_085315_010--Hb_008727_040 Hb_006846_030 Hb_006846_030 Hb_085315_010--Hb_006846_030 Hb_012787_050 Hb_012787_050 Hb_085315_010--Hb_012787_050 Hb_085315_010--Hb_004893_010 Hb_085315_010--Hb_000127_080 Hb_032260_130--Hb_004893_010 Hb_000115_290 Hb_000115_290 Hb_032260_130--Hb_000115_290 Hb_032260_130--Hb_116194_010 Hb_007632_130 Hb_007632_130 Hb_032260_130--Hb_007632_130 Hb_002374_520 Hb_002374_520 Hb_032260_130--Hb_002374_520 Hb_008304_050 Hb_008304_050 Hb_004893_010--Hb_008304_050 Hb_003633_170 Hb_003633_170 Hb_004893_010--Hb_003633_170 Hb_031224_010 Hb_031224_010 Hb_004893_010--Hb_031224_010 Hb_003304_090 Hb_003304_090 Hb_004893_010--Hb_003304_090 Hb_116194_010--Hb_000115_290 Hb_002042_160 Hb_002042_160 Hb_116194_010--Hb_002042_160 Hb_002814_050 Hb_002814_050 Hb_116194_010--Hb_002814_050 Hb_004785_090 Hb_004785_090 Hb_116194_010--Hb_004785_090 Hb_003847_050 Hb_003847_050 Hb_019026_050--Hb_003847_050 Hb_023956_010 Hb_023956_010 Hb_019026_050--Hb_023956_010 Hb_019026_050--Hb_006846_030 Hb_002553_070 Hb_002553_070 Hb_019026_050--Hb_002553_070 Hb_000120_320 Hb_000120_320 Hb_019026_050--Hb_000120_320 Hb_019026_050--Hb_007632_130 Hb_004282_010 Hb_004282_010 Hb_000127_080--Hb_004282_010 Hb_006501_100 Hb_006501_100 Hb_000127_080--Hb_006501_100 Hb_000956_070 Hb_000956_070 Hb_000127_080--Hb_000956_070 Hb_000127_080--Hb_007632_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.109655 1.34346 0.85194 6.0068 0.0293467 0.030819
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.0508342 3.97162 2.4332

CAGE analysis